Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.83■■□□□ 1.73
Fam196aQ3USH1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Fam196aQ3USH1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Fam196aQ3USH1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Fam196aQ3USH1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Fam196aQ3USH1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Fam196aQ3USH1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.79■■□□□ 1.72
Fam196aQ3USH1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Fam196aQ3USH1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Fam196aQ3USH1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Fam196aQ3USH1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Fam196aQ3USH1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.73■■□□□ 1.71
Fam196aQ3USH1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Fam196aQ3USH1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Fam196aQ3USH1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Fam196aQ3USH1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Fam196aQ3USH1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Fam196aQ3USH1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Fam196aQ3USH1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.69■■□□□ 1.7
Fam196aQ3USH1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Fam196aQ3USH1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Fam196aQ3USH1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Fam196aQ3USH1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Fam196aQ3USH1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Fam196aQ3USH1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Fam196aQ3USH1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Fam196aQ3USH1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Fam196aQ3USH1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Fam196aQ3USH1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
Fam196aQ3USH1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Fam196aQ3USH1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.61■■□□□ 1.69
Fam196aQ3USH1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Fam196aQ3USH1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Fam196aQ3USH1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Fam196aQ3USH1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.59■■□□□ 1.69
Fam196aQ3USH1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.58■■□□□ 1.69
Fam196aQ3USH1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.57■■□□□ 1.68
Fam196aQ3USH1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Fam196aQ3USH1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Fam196aQ3USH1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Fam196aQ3USH1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.56■■□□□ 1.68
Fam196aQ3USH1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Fam196aQ3USH1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.55■■□□□ 1.68
Fam196aQ3USH1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Fam196aQ3USH1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Fam196aQ3USH1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Fam196aQ3USH1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Fam196aQ3USH1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Fam196aQ3USH1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Fam196aQ3USH1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Fam196aQ3USH1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Fam196aQ3USH1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Fam196aQ3USH1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.49■■□□□ 1.67
Fam196aQ3USH1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Fam196aQ3USH1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Fam196aQ3USH1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Fam196aQ3USH1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.45■■□□□ 1.67
Fam196aQ3USH1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Fam196aQ3USH1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.44■■□□□ 1.66
Fam196aQ3USH1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Fam196aQ3USH1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Fam196aQ3USH1 Gm6311-201ENSMUST00000073790 878 ntBASIC25.43■■□□□ 1.66
Fam196aQ3USH1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Fam196aQ3USH1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Fam196aQ3USH1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Fam196aQ3USH1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Fam196aQ3USH1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.42■■□□□ 1.66
Fam196aQ3USH1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.41■■□□□ 1.66
Fam196aQ3USH1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Fam196aQ3USH1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.4■■□□□ 1.66
Fam196aQ3USH1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Fam196aQ3USH1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Fam196aQ3USH1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.4■■□□□ 1.66
Fam196aQ3USH1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Fam196aQ3USH1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Fam196aQ3USH1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Fam196aQ3USH1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Fam196aQ3USH1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Fam196aQ3USH1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Fam196aQ3USH1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Fam196aQ3USH1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Fam196aQ3USH1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Fam196aQ3USH1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Fam196aQ3USH1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Fam196aQ3USH1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Fam196aQ3USH1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.34■■□□□ 1.65
Fam196aQ3USH1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.33■■□□□ 1.65
Fam196aQ3USH1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Fam196aQ3USH1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Fam196aQ3USH1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.31■■□□□ 1.64
Fam196aQ3USH1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Fam196aQ3USH1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Fam196aQ3USH1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Fam196aQ3USH1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Fam196aQ3USH1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Fam196aQ3USH1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Fam196aQ3USH1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.28■■□□□ 1.64
Fam196aQ3USH1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.28■■□□□ 1.64
Fam196aQ3USH1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Fam196aQ3USH1 Gm15039-201ENSMUST00000118914 875 ntBASIC25.27■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms