Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Fndc4Q3TR08 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fndc4Q3TR08 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Fndc4Q3TR08 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Fndc4Q3TR08 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Fndc4Q3TR08 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Fndc4Q3TR08 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.77■□□□□ 0.92
Fndc4Q3TR08 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fndc4Q3TR08 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Fndc4Q3TR08 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fndc4Q3TR08 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Fndc4Q3TR08 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.75■□□□□ 0.91
Fndc4Q3TR08 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.75■□□□□ 0.91
Fndc4Q3TR08 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fndc4Q3TR08 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fndc4Q3TR08 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Fndc4Q3TR08 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Fndc4Q3TR08 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.71■□□□□ 0.91
Fndc4Q3TR08 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Fndc4Q3TR08 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fndc4Q3TR08 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.7■□□□□ 0.9
Fndc4Q3TR08 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Fndc4Q3TR08 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fndc4Q3TR08 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fndc4Q3TR08 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Fndc4Q3TR08 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fndc4Q3TR08 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Fndc4Q3TR08 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Fndc4Q3TR08 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Fndc4Q3TR08 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Fndc4Q3TR08 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Fndc4Q3TR08 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Fndc4Q3TR08 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fndc4Q3TR08 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.66■□□□□ 0.9
Fndc4Q3TR08 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.66■□□□□ 0.9
Fndc4Q3TR08 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Fndc4Q3TR08 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Fndc4Q3TR08 Gm16148-201ENSMUST00000119653 893 ntBASIC20.64■□□□□ 0.89
Fndc4Q3TR08 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Fndc4Q3TR08 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fndc4Q3TR08 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Fndc4Q3TR08 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Fndc4Q3TR08 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fndc4Q3TR08 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Fndc4Q3TR08 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Fndc4Q3TR08 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fndc4Q3TR08 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fndc4Q3TR08 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fndc4Q3TR08 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fndc4Q3TR08 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Fndc4Q3TR08 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fndc4Q3TR08 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fndc4Q3TR08 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fndc4Q3TR08 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Fndc4Q3TR08 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.59■□□□□ 0.89
Fndc4Q3TR08 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Fndc4Q3TR08 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Fndc4Q3TR08 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fndc4Q3TR08 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fndc4Q3TR08 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.58■□□□□ 0.88
Fndc4Q3TR08 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Fndc4Q3TR08 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fndc4Q3TR08 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Fndc4Q3TR08 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fndc4Q3TR08 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.55■□□□□ 0.88
Fndc4Q3TR08 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Fndc4Q3TR08 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fndc4Q3TR08 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fndc4Q3TR08 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fndc4Q3TR08 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Fndc4Q3TR08 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fndc4Q3TR08 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fndc4Q3TR08 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fndc4Q3TR08 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fndc4Q3TR08 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fndc4Q3TR08 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fndc4Q3TR08 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Fndc4Q3TR08 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fndc4Q3TR08 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fndc4Q3TR08 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fndc4Q3TR08 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fndc4Q3TR08 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Fndc4Q3TR08 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Fndc4Q3TR08 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fndc4Q3TR08 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fndc4Q3TR08 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.45■□□□□ 0.86
Fndc4Q3TR08 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fndc4Q3TR08 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fndc4Q3TR08 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fndc4Q3TR08 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Fndc4Q3TR08 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Fndc4Q3TR08 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Fndc4Q3TR08 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fndc4Q3TR08 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms