Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Notch1Q01705 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Notch1Q01705 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Notch1Q01705 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.44■□□□□ 0.54
Notch1Q01705 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Notch1Q01705 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Notch1Q01705 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.43■□□□□ 0.54
Notch1Q01705 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Notch1Q01705 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Notch1Q01705 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.42■□□□□ 0.54
Notch1Q01705 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Notch1Q01705 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Notch1Q01705 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Notch1Q01705 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.4■□□□□ 0.54
Notch1Q01705 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Notch1Q01705 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Notch1Q01705 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Notch1Q01705 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Notch1Q01705 Cap2-205ENSMUST00000225824 1634 ntBASIC18.38■□□□□ 0.53
Notch1Q01705 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Notch1Q01705 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Notch1Q01705 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Notch1Q01705 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Notch1Q01705 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Notch1Q01705 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Notch1Q01705 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Notch1Q01705 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Notch1Q01705 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Notch1Q01705 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Notch1Q01705 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Notch1Q01705 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Notch1Q01705 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.3■□□□□ 0.52
Notch1Q01705 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Notch1Q01705 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.29■□□□□ 0.52
Notch1Q01705 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Notch1Q01705 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Notch1Q01705 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Notch1Q01705 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Notch1Q01705 Gm15039-201ENSMUST00000118914 875 ntBASIC18.28■□□□□ 0.52
Notch1Q01705 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Notch1Q01705 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Notch1Q01705 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Notch1Q01705 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Notch1Q01705 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Notch1Q01705 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Notch1Q01705 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.26■□□□□ 0.51
Notch1Q01705 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Notch1Q01705 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Notch1Q01705 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Notch1Q01705 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Notch1Q01705 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Notch1Q01705 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Notch1Q01705 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Notch1Q01705 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
Notch1Q01705 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.2■□□□□ 0.5
Notch1Q01705 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Notch1Q01705 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.2■□□□□ 0.5
Notch1Q01705 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Notch1Q01705 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Notch1Q01705 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Notch1Q01705 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Notch1Q01705 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Notch1Q01705 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Notch1Q01705 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Notch1Q01705 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Notch1Q01705 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Notch1Q01705 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Notch1Q01705 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.15■□□□□ 0.5
Notch1Q01705 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
Notch1Q01705 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Notch1Q01705 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.14■□□□□ 0.49
Notch1Q01705 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Notch1Q01705 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Notch1Q01705 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.13■□□□□ 0.49
Notch1Q01705 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Notch1Q01705 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Notch1Q01705 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.13■□□□□ 0.49
Notch1Q01705 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.11■□□□□ 0.49
Notch1Q01705 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Notch1Q01705 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Notch1Q01705 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.1■□□□□ 0.49
Notch1Q01705 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Notch1Q01705 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Notch1Q01705 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Notch1Q01705 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Notch1Q01705 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Notch1Q01705 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Notch1Q01705 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Notch1Q01705 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Notch1Q01705 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Notch1Q01705 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.07■□□□□ 0.48
Notch1Q01705 Gm6311-201ENSMUST00000073790 878 ntBASIC18.07■□□□□ 0.48
Notch1Q01705 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Notch1Q01705 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Notch1Q01705 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Notch1Q01705 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Notch1Q01705 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.06■□□□□ 0.48
Notch1Q01705 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.05■□□□□ 0.48
Notch1Q01705 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Notch1Q01705 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms