Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smn1P97801 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smn1P97801 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smn1P97801 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smn1P97801 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smn1P97801 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smn1P97801 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smn1P97801 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smn1P97801 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smn1P97801 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smn1P97801 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smn1P97801 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.06■□□□□ 0.96
Smn1P97801 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smn1P97801 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smn1P97801 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smn1P97801 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smn1P97801 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.03■□□□□ 0.96
Smn1P97801 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smn1P97801 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smn1P97801 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.02■□□□□ 0.96
Smn1P97801 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smn1P97801 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Smn1P97801 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.01■□□□□ 0.95
Smn1P97801 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smn1P97801 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smn1P97801 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smn1P97801 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smn1P97801 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.98■□□□□ 0.95
Smn1P97801 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smn1P97801 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smn1P97801 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smn1P97801 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smn1P97801 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smn1P97801 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Smn1P97801 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.97■□□□□ 0.95
Smn1P97801 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smn1P97801 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smn1P97801 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smn1P97801 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smn1P97801 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smn1P97801 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smn1P97801 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smn1P97801 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smn1P97801 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smn1P97801 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Smn1P97801 Peli2-204ENSMUST00000226513 1320 ntBASIC20.93■□□□□ 0.94
Smn1P97801 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smn1P97801 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.92■□□□□ 0.94
Smn1P97801 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.92■□□□□ 0.94
Smn1P97801 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smn1P97801 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smn1P97801 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smn1P97801 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smn1P97801 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smn1P97801 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Smn1P97801 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smn1P97801 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smn1P97801 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smn1P97801 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smn1P97801 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Smn1P97801 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smn1P97801 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smn1P97801 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Smn1P97801 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smn1P97801 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smn1P97801 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smn1P97801 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smn1P97801 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Smn1P97801 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smn1P97801 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smn1P97801 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Smn1P97801 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Smn1P97801 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smn1P97801 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Smn1P97801 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smn1P97801 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smn1P97801 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Smn1P97801 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smn1P97801 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smn1P97801 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smn1P97801 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.78■□□□□ 0.92
Smn1P97801 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Smn1P97801 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smn1P97801 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smn1P97801 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smn1P97801 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smn1P97801 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smn1P97801 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smn1P97801 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smn1P97801 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smn1P97801 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smn1P97801 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smn1P97801 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smn1P97801 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smn1P97801 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smn1P97801 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smn1P97801 Gm8109-201ENSMUST00000194076 746 ntBASIC20.72■□□□□ 0.91
Smn1P97801 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smn1P97801 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smn1P97801 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms