Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gcm1P70348 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gcm1P70348 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Gcm1P70348 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Gcm1P70348 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gcm1P70348 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gcm1P70348 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gcm1P70348 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gcm1P70348 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Gcm1P70348 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.63■□□□□ 0.89
Gcm1P70348 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Gcm1P70348 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gcm1P70348 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.61■□□□□ 0.89
Gcm1P70348 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gcm1P70348 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gcm1P70348 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.59■□□□□ 0.89
Gcm1P70348 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.59■□□□□ 0.89
Gcm1P70348 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gcm1P70348 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gcm1P70348 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.57■□□□□ 0.88
Gcm1P70348 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gcm1P70348 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gcm1P70348 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gcm1P70348 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Gcm1P70348 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gcm1P70348 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gcm1P70348 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gcm1P70348 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gcm1P70348 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.52■□□□□ 0.88
Gcm1P70348 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gcm1P70348 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gcm1P70348 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gcm1P70348 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gcm1P70348 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gcm1P70348 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gcm1P70348 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gcm1P70348 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gcm1P70348 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gcm1P70348 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gcm1P70348 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Gcm1P70348 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gcm1P70348 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gcm1P70348 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gcm1P70348 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gcm1P70348 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gcm1P70348 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gcm1P70348 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gcm1P70348 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gcm1P70348 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gcm1P70348 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gcm1P70348 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gcm1P70348 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Gcm1P70348 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gcm1P70348 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Gcm1P70348 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
Gcm1P70348 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gcm1P70348 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.42■□□□□ 0.86
Gcm1P70348 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.42■□□□□ 0.86
Gcm1P70348 Zxda-201ENSMUST00000117281 2621 ntBASIC20.41■□□□□ 0.86
Gcm1P70348 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Gcm1P70348 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gcm1P70348 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Gcm1P70348 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.4■□□□□ 0.86
Gcm1P70348 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.4■□□□□ 0.86
Gcm1P70348 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gcm1P70348 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gcm1P70348 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.37■□□□□ 0.85
Gcm1P70348 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Gcm1P70348 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gcm1P70348 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gcm1P70348 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gcm1P70348 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gcm1P70348 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gcm1P70348 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gcm1P70348 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gcm1P70348 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gcm1P70348 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gcm1P70348 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gcm1P70348 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gcm1P70348 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gcm1P70348 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.3■□□□□ 0.84
Gcm1P70348 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.3■□□□□ 0.84
Gcm1P70348 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gcm1P70348 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gcm1P70348 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gcm1P70348 Gm8503-201ENSMUST00000118131 455 ntBASIC20.29■□□□□ 0.84
Gcm1P70348 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gcm1P70348 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gcm1P70348 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gcm1P70348 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gcm1P70348 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gcm1P70348 Gm6821-201ENSMUST00000107540 542 ntBASIC20.27■□□□□ 0.84
Gcm1P70348 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gcm1P70348 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gcm1P70348 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Gcm1P70348 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.25■□□□□ 0.83
Gcm1P70348 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gcm1P70348 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.25■□□□□ 0.83
Gcm1P70348 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gcm1P70348 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms