Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim4P70271 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim4P70271 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim4P70271 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim4P70271 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pdlim4P70271 Gm9397-201ENSMUST00000200125 605 ntBASIC20.41■□□□□ 0.86
Pdlim4P70271 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim4P70271 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim4P70271 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim4P70271 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim4P70271 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim4P70271 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim4P70271 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim4P70271 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim4P70271 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim4P70271 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Pdlim4P70271 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pdlim4P70271 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim4P70271 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdlim4P70271 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.38■□□□□ 0.85
Pdlim4P70271 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim4P70271 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim4P70271 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.36■□□□□ 0.85
Pdlim4P70271 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim4P70271 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim4P70271 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim4P70271 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pdlim4P70271 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim4P70271 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim4P70271 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim4P70271 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.32■□□□□ 0.84
Pdlim4P70271 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim4P70271 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim4P70271 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Pdlim4P70271 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim4P70271 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.3■□□□□ 0.84
Pdlim4P70271 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.29■□□□□ 0.84
Pdlim4P70271 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Pdlim4P70271 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim4P70271 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim4P70271 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim4P70271 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim4P70271 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pdlim4P70271 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim4P70271 Gm24970-201ENSMUST00000175582 82 ntBASIC20.28■□□□□ 0.84
Pdlim4P70271 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.28■□□□□ 0.84
Pdlim4P70271 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pdlim4P70271 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim4P70271 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim4P70271 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim4P70271 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.26■□□□□ 0.83
Pdlim4P70271 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim4P70271 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim4P70271 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim4P70271 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim4P70271 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim4P70271 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim4P70271 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim4P70271 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim4P70271 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim4P70271 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim4P70271 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.22■□□□□ 0.83
Pdlim4P70271 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim4P70271 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Pdlim4P70271 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim4P70271 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim4P70271 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim4P70271 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim4P70271 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Pdlim4P70271 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim4P70271 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Pdlim4P70271 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.19■□□□□ 0.82
Pdlim4P70271 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim4P70271 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim4P70271 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim4P70271 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pdlim4P70271 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.17■□□□□ 0.82
Pdlim4P70271 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pdlim4P70271 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim4P70271 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim4P70271 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim4P70271 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.15■□□□□ 0.82
Pdlim4P70271 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pdlim4P70271 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.14■□□□□ 0.81
Pdlim4P70271 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.13■□□□□ 0.81
Pdlim4P70271 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim4P70271 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim4P70271 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim4P70271 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.13■□□□□ 0.81
Pdlim4P70271 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim4P70271 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pdlim4P70271 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim4P70271 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim4P70271 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim4P70271 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.11■□□□□ 0.81
Pdlim4P70271 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim4P70271 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim4P70271 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.1■□□□□ 0.81
Pdlim4P70271 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.1■□□□□ 0.81
Pdlim4P70271 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms