Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.15■□□□□ 0.98
Hmga2P52927 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmga2P52927 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmga2P52927 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmga2P52927 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmga2P52927 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Hmga2P52927 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmga2P52927 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmga2P52927 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Hmga2P52927 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmga2P52927 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hmga2P52927 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Hmga2P52927 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.11■□□□□ 0.97
Hmga2P52927 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hmga2P52927 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmga2P52927 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmga2P52927 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.1■□□□□ 0.97
Hmga2P52927 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmga2P52927 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.1■□□□□ 0.97
Hmga2P52927 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmga2P52927 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmga2P52927 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmga2P52927 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmga2P52927 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Hmga2P52927 Gm27322-201ENSMUST00000184007 104 ntBASIC21.08■□□□□ 0.97
Hmga2P52927 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hmga2P52927 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmga2P52927 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Hmga2P52927 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.07■□□□□ 0.96
Hmga2P52927 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Hmga2P52927 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Hmga2P52927 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmga2P52927 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmga2P52927 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmga2P52927 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmga2P52927 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmga2P52927 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmga2P52927 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmga2P52927 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Hmga2P52927 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmga2P52927 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Hmga2P52927 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21■□□□□ 0.95
Hmga2P52927 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmga2P52927 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hmga2P52927 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmga2P52927 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmga2P52927 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmga2P52927 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmga2P52927 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmga2P52927 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.97■□□□□ 0.95
Hmga2P52927 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Hmga2P52927 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Hmga2P52927 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmga2P52927 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmga2P52927 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmga2P52927 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmga2P52927 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmga2P52927 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmga2P52927 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmga2P52927 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hmga2P52927 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmga2P52927 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Hmga2P52927 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hmga2P52927 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmga2P52927 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hmga2P52927 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Hmga2P52927 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmga2P52927 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmga2P52927 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmga2P52927 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hmga2P52927 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmga2P52927 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Hmga2P52927 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmga2P52927 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmga2P52927 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hmga2P52927 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Hmga2P52927 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hmga2P52927 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmga2P52927 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmga2P52927 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.84■□□□□ 0.93
Hmga2P52927 Peli2-204ENSMUST00000226513 1320 ntBASIC20.84■□□□□ 0.93
Hmga2P52927 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmga2P52927 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.84■□□□□ 0.93
Hmga2P52927 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmga2P52927 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmga2P52927 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hmga2P52927 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Hmga2P52927 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Hmga2P52927 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Hmga2P52927 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmga2P52927 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Hmga2P52927 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Hmga2P52927 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.79■□□□□ 0.92
Hmga2P52927 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmga2P52927 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hmga2P52927 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmga2P52927 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmga2P52927 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hmga2P52927 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmga2P52927 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms