Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp9P49962 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Srp9P49962 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.69■□□□□ 0.9
Srp9P49962 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srp9P49962 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srp9P49962 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Srp9P49962 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Srp9P49962 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srp9P49962 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp9P49962 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp9P49962 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Srp9P49962 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.65■□□□□ 0.9
Srp9P49962 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Srp9P49962 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Srp9P49962 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Srp9P49962 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Srp9P49962 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Srp9P49962 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Srp9P49962 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Srp9P49962 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srp9P49962 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srp9P49962 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srp9P49962 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Srp9P49962 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.6■□□□□ 0.89
Srp9P49962 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Srp9P49962 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Srp9P49962 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Srp9P49962 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Srp9P49962 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Srp9P49962 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Srp9P49962 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Srp9P49962 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Srp9P49962 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Srp9P49962 Gm16148-201ENSMUST00000119653 893 ntBASIC20.58■□□□□ 0.89
Srp9P49962 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Srp9P49962 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Srp9P49962 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.57■□□□□ 0.88
Srp9P49962 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Srp9P49962 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Srp9P49962 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.56■□□□□ 0.88
Srp9P49962 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Srp9P49962 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srp9P49962 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Srp9P49962 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Srp9P49962 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Srp9P49962 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srp9P49962 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.54■□□□□ 0.88
Srp9P49962 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Srp9P49962 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Srp9P49962 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.53■□□□□ 0.88
Srp9P49962 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Srp9P49962 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.52■□□□□ 0.88
Srp9P49962 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srp9P49962 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srp9P49962 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srp9P49962 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Srp9P49962 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Srp9P49962 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Srp9P49962 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srp9P49962 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srp9P49962 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Srp9P49962 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srp9P49962 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srp9P49962 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srp9P49962 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Srp9P49962 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Srp9P49962 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.49■□□□□ 0.87
Srp9P49962 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srp9P49962 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Srp9P49962 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srp9P49962 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srp9P49962 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Srp9P49962 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Srp9P49962 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Srp9P49962 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Srp9P49962 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.46■□□□□ 0.87
Srp9P49962 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.46■□□□□ 0.87
Srp9P49962 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.46■□□□□ 0.87
Srp9P49962 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Srp9P49962 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Srp9P49962 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Srp9P49962 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Srp9P49962 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Srp9P49962 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Srp9P49962 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Srp9P49962 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Srp9P49962 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.41■□□□□ 0.86
Srp9P49962 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srp9P49962 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srp9P49962 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Srp9P49962 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Srp9P49962 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.39■□□□□ 0.86
Srp9P49962 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Srp9P49962 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Srp9P49962 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Srp9P49962 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Srp9P49962 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Srp9P49962 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Srp9P49962 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Srp9P49962 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 186.8 ms