Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmx3P42581 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmx3P42581 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmx3P42581 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmx3P42581 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmx3P42581 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmx3P42581 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hmx3P42581 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Hmx3P42581 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Hmx3P42581 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmx3P42581 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmx3P42581 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmx3P42581 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmx3P42581 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmx3P42581 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.13■□□□□ 0.81
Hmx3P42581 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Hmx3P42581 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmx3P42581 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmx3P42581 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmx3P42581 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmx3P42581 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmx3P42581 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hmx3P42581 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmx3P42581 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmx3P42581 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Hmx3P42581 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hmx3P42581 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmx3P42581 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmx3P42581 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmx3P42581 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmx3P42581 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmx3P42581 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmx3P42581 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmx3P42581 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmx3P42581 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Hmx3P42581 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Hmx3P42581 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmx3P42581 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hmx3P42581 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmx3P42581 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmx3P42581 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hmx3P42581 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmx3P42581 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmx3P42581 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Hmx3P42581 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmx3P42581 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmx3P42581 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hmx3P42581 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmx3P42581 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hmx3P42581 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmx3P42581 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmx3P42581 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hmx3P42581 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmx3P42581 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hmx3P42581 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hmx3P42581 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmx3P42581 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmx3P42581 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmx3P42581 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.02■□□□□ 0.8
Hmx3P42581 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hmx3P42581 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hmx3P42581 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hmx3P42581 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmx3P42581 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmx3P42581 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmx3P42581 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.97■□□□□ 0.79
Hmx3P42581 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hmx3P42581 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmx3P42581 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Hmx3P42581 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.96■□□□□ 0.79
Hmx3P42581 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmx3P42581 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hmx3P42581 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.96■□□□□ 0.79
Hmx3P42581 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hmx3P42581 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Hmx3P42581 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmx3P42581 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmx3P42581 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmx3P42581 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hmx3P42581 Peli2-204ENSMUST00000226513 1320 ntBASIC19.95■□□□□ 0.78
Hmx3P42581 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmx3P42581 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmx3P42581 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmx3P42581 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hmx3P42581 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmx3P42581 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.93■□□□□ 0.78
Hmx3P42581 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Hmx3P42581 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmx3P42581 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmx3P42581 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmx3P42581 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmx3P42581 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmx3P42581 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmx3P42581 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Hmx3P42581 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmx3P42581 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hmx3P42581 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hmx3P42581 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmx3P42581 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hmx3P42581 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms