Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col8a2P25318 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Col8a2P25318 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Col8a2P25318 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col8a2P25318 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col8a2P25318 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col8a2P25318 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col8a2P25318 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col8a2P25318 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Col8a2P25318 Gm24970-201ENSMUST00000175582 82 ntBASIC20.97■□□□□ 0.95
Col8a2P25318 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.97■□□□□ 0.95
Col8a2P25318 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col8a2P25318 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Col8a2P25318 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.96■□□□□ 0.95
Col8a2P25318 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Col8a2P25318 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.95■□□□□ 0.94
Col8a2P25318 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col8a2P25318 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col8a2P25318 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Col8a2P25318 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col8a2P25318 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col8a2P25318 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col8a2P25318 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col8a2P25318 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.9■□□□□ 0.94
Col8a2P25318 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col8a2P25318 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col8a2P25318 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col8a2P25318 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col8a2P25318 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col8a2P25318 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col8a2P25318 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.87■□□□□ 0.93
Col8a2P25318 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Col8a2P25318 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col8a2P25318 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col8a2P25318 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col8a2P25318 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Col8a2P25318 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col8a2P25318 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.85■□□□□ 0.93
Col8a2P25318 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.84■□□□□ 0.93
Col8a2P25318 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col8a2P25318 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col8a2P25318 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col8a2P25318 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col8a2P25318 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.81■□□□□ 0.92
Col8a2P25318 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col8a2P25318 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col8a2P25318 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.81■□□□□ 0.92
Col8a2P25318 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col8a2P25318 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col8a2P25318 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.79■□□□□ 0.92
Col8a2P25318 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col8a2P25318 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col8a2P25318 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col8a2P25318 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col8a2P25318 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col8a2P25318 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Col8a2P25318 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col8a2P25318 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.75■□□□□ 0.91
Col8a2P25318 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col8a2P25318 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col8a2P25318 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col8a2P25318 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.73■□□□□ 0.91
Col8a2P25318 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Col8a2P25318 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Col8a2P25318 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Col8a2P25318 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Col8a2P25318 Zxda-201ENSMUST00000117281 2621 ntBASIC20.7■□□□□ 0.9
Col8a2P25318 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.7■□□□□ 0.9
Col8a2P25318 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col8a2P25318 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col8a2P25318 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col8a2P25318 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col8a2P25318 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col8a2P25318 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col8a2P25318 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col8a2P25318 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.68■□□□□ 0.9
Col8a2P25318 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col8a2P25318 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.66■□□□□ 0.9
Col8a2P25318 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col8a2P25318 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col8a2P25318 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col8a2P25318 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.66■□□□□ 0.9
Col8a2P25318 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col8a2P25318 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col8a2P25318 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Col8a2P25318 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.64■□□□□ 0.89
Col8a2P25318 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col8a2P25318 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col8a2P25318 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col8a2P25318 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col8a2P25318 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col8a2P25318 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.63■□□□□ 0.89
Col8a2P25318 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col8a2P25318 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.62■□□□□ 0.89
Col8a2P25318 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col8a2P25318 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col8a2P25318 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col8a2P25318 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col8a2P25318 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.61■□□□□ 0.89
Col8a2P25318 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms