Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
P04945 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
P04945 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.46■■□□□ 1.03
P04945 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
P04945 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
P04945 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P04945 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
P04945 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P04945 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.45■■□□□ 1.02
P04945 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P04945 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P04945 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P04945 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
P04945 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
P04945 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
P04945 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
P04945 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
P04945 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.41■■□□□ 1.02
P04945 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P04945 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P04945 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
P04945 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
P04945 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.39■■□□□ 1.01
P04945 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P04945 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
P04945 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
P04945 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
P04945 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
P04945 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
P04945 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
P04945 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
P04945 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
P04945 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
P04945 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.34■■□□□ 1.01
P04945 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
P04945 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
P04945 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
P04945 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
P04945 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.32■■□□□ 1
P04945 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
P04945 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.32■■□□□ 1
P04945 Amer2-203ENSMUST00000225247 2662 ntBASIC21.32■■□□□ 1
P04945 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
P04945 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.31■■□□□ 1
P04945 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
P04945 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
P04945 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.3■■□□□ 1
P04945 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.3■■□□□ 1
P04945 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
P04945 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P04945 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
P04945 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
P04945 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P04945 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
P04945 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
P04945 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.27■■□□□ 1
P04945 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
P04945 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
P04945 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.25■□□□□ 0.99
P04945 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.25■□□□□ 0.99
P04945 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
P04945 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.23■□□□□ 0.99
P04945 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.23■□□□□ 0.99
P04945 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P04945 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P04945 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P04945 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
P04945 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
P04945 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
P04945 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P04945 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
P04945 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
P04945 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P04945 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P04945 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P04945 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P04945 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P04945 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.16■□□□□ 0.98
P04945 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
P04945 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P04945 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
P04945 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
P04945 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
P04945 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
P04945 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P04945 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.13■□□□□ 0.97
P04945 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
P04945 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P04945 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P04945 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.11■□□□□ 0.97
P04945 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P04945 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
P04945 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P04945 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P04945 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
P04945 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P04945 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
P04945 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P04945 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
P04945 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms