Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
P01804 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P01804 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.4■■□□□ 1.02
P01804 Gm24970-201ENSMUST00000175582 82 ntBASIC21.4■■□□□ 1.02
P01804 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P01804 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P01804 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.39■■□□□ 1.01
P01804 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P01804 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P01804 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
P01804 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
P01804 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
P01804 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
P01804 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
P01804 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
P01804 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
P01804 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.37■■□□□ 1.01
P01804 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
P01804 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.36■■□□□ 1.01
P01804 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
P01804 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
P01804 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
P01804 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
P01804 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
P01804 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
P01804 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
P01804 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
P01804 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.31■■□□□ 1
P01804 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P01804 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.29■■□□□ 1
P01804 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P01804 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
P01804 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
P01804 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.28■■□□□ 1
P01804 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.28■■□□□ 1
P01804 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
P01804 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.28■■□□□ 1
P01804 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
P01804 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
P01804 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
P01804 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
P01804 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P01804 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
P01804 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
P01804 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
P01804 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
P01804 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
P01804 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
P01804 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P01804 Zxda-201ENSMUST00000117281 2621 ntBASIC21.24■□□□□ 0.99
P01804 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.23■□□□□ 0.99
P01804 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01804 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.22■□□□□ 0.99
P01804 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P01804 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.22■□□□□ 0.99
P01804 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
P01804 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.19■□□□□ 0.98
P01804 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
P01804 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01804 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01804 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
P01804 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
P01804 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01804 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
P01804 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P01804 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.17■□□□□ 0.98
P01804 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
P01804 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.17■□□□□ 0.98
P01804 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P01804 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.16■□□□□ 0.98
P01804 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.15■□□□□ 0.98
P01804 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
P01804 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P01804 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.12■□□□□ 0.97
P01804 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.12■□□□□ 0.97
P01804 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P01804 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P01804 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P01804 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
P01804 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01804 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.09■□□□□ 0.97
P01804 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
P01804 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
P01804 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
P01804 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
P01804 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.08■□□□□ 0.96
P01804 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01804 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01804 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.07■□□□□ 0.96
P01804 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.07■□□□□ 0.96
P01804 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
P01804 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01804 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
P01804 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.06■□□□□ 0.96
P01804 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.06■□□□□ 0.96
P01804 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.05■□□□□ 0.96
P01804 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P01804 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P01804 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P01804 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms