Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abcd4O89016 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abcd4O89016 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abcd4O89016 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Abcd4O89016 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.24■■□□□ 1.15
Abcd4O89016 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Abcd4O89016 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.24■■□□□ 1.15
Abcd4O89016 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Abcd4O89016 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Abcd4O89016 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Abcd4O89016 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Abcd4O89016 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Abcd4O89016 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.21■■□□□ 1.15
Abcd4O89016 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Abcd4O89016 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Abcd4O89016 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Abcd4O89016 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Abcd4O89016 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.19■■□□□ 1.14
Abcd4O89016 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
Abcd4O89016 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Abcd4O89016 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Abcd4O89016 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Abcd4O89016 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Abcd4O89016 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.15■■□□□ 1.14
Abcd4O89016 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Abcd4O89016 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.13■■□□□ 1.13
Abcd4O89016 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Abcd4O89016 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.13■■□□□ 1.13
Abcd4O89016 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Abcd4O89016 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Abcd4O89016 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.11■■□□□ 1.13
Abcd4O89016 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Abcd4O89016 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Abcd4O89016 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Abcd4O89016 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Abcd4O89016 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Abcd4O89016 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Abcd4O89016 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Abcd4O89016 Gm6821-201ENSMUST00000107540 542 ntBASIC22.07■■□□□ 1.12
Abcd4O89016 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Abcd4O89016 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Abcd4O89016 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.07■■□□□ 1.12
Abcd4O89016 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Abcd4O89016 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Abcd4O89016 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Abcd4O89016 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.06■■□□□ 1.12
Abcd4O89016 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Abcd4O89016 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Abcd4O89016 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Abcd4O89016 Gm8503-201ENSMUST00000118131 455 ntBASIC22.03■■□□□ 1.12
Abcd4O89016 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abcd4O89016 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Abcd4O89016 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Abcd4O89016 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abcd4O89016 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abcd4O89016 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.02■■□□□ 1.12
Abcd4O89016 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Abcd4O89016 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Abcd4O89016 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Abcd4O89016 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Abcd4O89016 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Abcd4O89016 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22■■□□□ 1.11
Abcd4O89016 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Abcd4O89016 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Abcd4O89016 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Abcd4O89016 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Abcd4O89016 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Abcd4O89016 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.99■■□□□ 1.11
Abcd4O89016 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.98■■□□□ 1.11
Abcd4O89016 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Abcd4O89016 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
Abcd4O89016 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Abcd4O89016 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Abcd4O89016 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Abcd4O89016 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.95■■□□□ 1.1
Abcd4O89016 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Abcd4O89016 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Abcd4O89016 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
Abcd4O89016 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Abcd4O89016 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Abcd4O89016 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Abcd4O89016 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Abcd4O89016 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Abcd4O89016 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Abcd4O89016 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Abcd4O89016 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Abcd4O89016 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Abcd4O89016 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.88■■□□□ 1.09
Abcd4O89016 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Abcd4O89016 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Abcd4O89016 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Abcd4O89016 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Abcd4O89016 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Abcd4O89016 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Abcd4O89016 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.85■■□□□ 1.09
Abcd4O89016 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.85■■□□□ 1.09
Abcd4O89016 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Abcd4O89016 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Abcd4O89016 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Abcd4O89016 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms