Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hdac3O88895 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hdac3O88895 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.85■■□□□ 1.09
Hdac3O88895 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hdac3O88895 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Hdac3O88895 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hdac3O88895 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hdac3O88895 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hdac3O88895 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hdac3O88895 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hdac3O88895 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.82■■□□□ 1.08
Hdac3O88895 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hdac3O88895 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac3O88895 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.8■■□□□ 1.08
Hdac3O88895 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac3O88895 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac3O88895 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hdac3O88895 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Hdac3O88895 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac3O88895 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac3O88895 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac3O88895 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Hdac3O88895 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac3O88895 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac3O88895 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac3O88895 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Hdac3O88895 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac3O88895 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac3O88895 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac3O88895 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac3O88895 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac3O88895 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.73■■□□□ 1.07
Hdac3O88895 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac3O88895 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Hdac3O88895 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac3O88895 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Hdac3O88895 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac3O88895 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.72■■□□□ 1.07
Hdac3O88895 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac3O88895 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.71■■□□□ 1.07
Hdac3O88895 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.71■■□□□ 1.07
Hdac3O88895 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac3O88895 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac3O88895 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac3O88895 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Hdac3O88895 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac3O88895 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac3O88895 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac3O88895 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac3O88895 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac3O88895 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac3O88895 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac3O88895 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac3O88895 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac3O88895 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Hdac3O88895 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac3O88895 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac3O88895 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Hdac3O88895 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Hdac3O88895 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Hdac3O88895 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac3O88895 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac3O88895 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac3O88895 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac3O88895 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Hdac3O88895 Zfp131-205ENSMUST00000223812 663 ntBASIC21.61■■□□□ 1.05
Hdac3O88895 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Hdac3O88895 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hdac3O88895 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac3O88895 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac3O88895 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac3O88895 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac3O88895 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac3O88895 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.59■■□□□ 1.05
Hdac3O88895 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac3O88895 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Hdac3O88895 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hdac3O88895 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac3O88895 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac3O88895 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac3O88895 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.56■■□□□ 1.04
Hdac3O88895 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac3O88895 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hdac3O88895 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hdac3O88895 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Hdac3O88895 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hdac3O88895 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hdac3O88895 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.54■■□□□ 1.04
Hdac3O88895 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hdac3O88895 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hdac3O88895 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hdac3O88895 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hdac3O88895 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hdac3O88895 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Hdac3O88895 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hdac3O88895 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.52■■□□□ 1.04
Hdac3O88895 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hdac3O88895 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.52■■□□□ 1.04
Hdac3O88895 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Hdac3O88895 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms