Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Cacna1hO88427 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Cacna1hO88427 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cacna1hO88427 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.36■■□□□ 1.65
Cacna1hO88427 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cacna1hO88427 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cacna1hO88427 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Cacna1hO88427 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cacna1hO88427 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cacna1hO88427 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.29■■□□□ 1.64
Cacna1hO88427 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cacna1hO88427 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Cacna1hO88427 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.27■■□□□ 1.64
Cacna1hO88427 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Cacna1hO88427 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Cacna1hO88427 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cacna1hO88427 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cacna1hO88427 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Cacna1hO88427 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Cacna1hO88427 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cacna1hO88427 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Cacna1hO88427 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Cacna1hO88427 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cacna1hO88427 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.23■■□□□ 1.63
Cacna1hO88427 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Cacna1hO88427 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cacna1hO88427 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.2■■□□□ 1.62
Cacna1hO88427 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cacna1hO88427 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.18■■□□□ 1.62
Cacna1hO88427 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cacna1hO88427 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
Cacna1hO88427 Gm6311-201ENSMUST00000073790 878 ntBASIC25.17■■□□□ 1.62
Cacna1hO88427 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.17■■□□□ 1.62
Cacna1hO88427 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
Cacna1hO88427 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cacna1hO88427 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.16■■□□□ 1.62
Cacna1hO88427 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.16■■□□□ 1.62
Cacna1hO88427 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.16■■□□□ 1.62
Cacna1hO88427 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cacna1hO88427 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cacna1hO88427 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.13■■□□□ 1.61
Cacna1hO88427 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Cacna1hO88427 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cacna1hO88427 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cacna1hO88427 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cacna1hO88427 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cacna1hO88427 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Cacna1hO88427 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cacna1hO88427 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.08■■□□□ 1.61
Cacna1hO88427 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Cacna1hO88427 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Cacna1hO88427 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Cacna1hO88427 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Cacna1hO88427 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cacna1hO88427 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.05■■□□□ 1.6
Cacna1hO88427 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Cacna1hO88427 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Cacna1hO88427 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Cacna1hO88427 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Cacna1hO88427 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cacna1hO88427 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.02■■□□□ 1.6
Cacna1hO88427 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.01■■□□□ 1.59
Cacna1hO88427 Gm12366-201ENSMUST00000121722 873 ntBASIC25.01■■□□□ 1.59
Cacna1hO88427 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.01■■□□□ 1.59
Cacna1hO88427 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.01■■□□□ 1.59
Cacna1hO88427 Gm5786-201ENSMUST00000085368 882 ntBASIC25.01■■□□□ 1.59
Cacna1hO88427 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cacna1hO88427 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25■■□□□ 1.59
Cacna1hO88427 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25■■□□□ 1.59
Cacna1hO88427 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Cacna1hO88427 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
Cacna1hO88427 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Cacna1hO88427 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Cacna1hO88427 Gm22567-201ENSMUST00000175542 342 ntBASIC24.98■■□□□ 1.59
Cacna1hO88427 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cacna1hO88427 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Cacna1hO88427 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cacna1hO88427 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.95■■□□□ 1.59
Cacna1hO88427 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cacna1hO88427 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.95■■□□□ 1.58
Cacna1hO88427 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cacna1hO88427 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cacna1hO88427 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cacna1hO88427 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.93■■□□□ 1.58
Cacna1hO88427 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cacna1hO88427 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cacna1hO88427 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cacna1hO88427 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.91■■□□□ 1.58
Cacna1hO88427 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cacna1hO88427 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cacna1hO88427 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cacna1hO88427 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.9■■□□□ 1.58
Cacna1hO88427 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cacna1hO88427 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Cacna1hO88427 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Cacna1hO88427 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Cacna1hO88427 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cacna1hO88427 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Cacna1hO88427 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cacna1hO88427 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms