Protein–RNA interactions for Protein: O70343

Ppargc1a, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppargc1aO70343 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ppargc1aO70343 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ppargc1aO70343 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ppargc1aO70343 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.84■■□□□ 1.73
Ppargc1aO70343 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ppargc1aO70343 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ppargc1aO70343 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Ppargc1aO70343 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.82■■□□□ 1.72
Ppargc1aO70343 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ppargc1aO70343 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ppargc1aO70343 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ppargc1aO70343 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ppargc1aO70343 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ppargc1aO70343 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ppargc1aO70343 Gm9397-201ENSMUST00000200125 605 ntBASIC25.8■■□□□ 1.72
Ppargc1aO70343 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.8■■□□□ 1.72
Ppargc1aO70343 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ppargc1aO70343 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Ppargc1aO70343 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Ppargc1aO70343 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ppargc1aO70343 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ppargc1aO70343 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Ppargc1aO70343 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.76■■□□□ 1.71
Ppargc1aO70343 Gm45855-201ENSMUST00000212546 880 ntBASIC25.76■■□□□ 1.71
Ppargc1aO70343 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.71
Ppargc1aO70343 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Ppargc1aO70343 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Ppargc1aO70343 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Ppargc1aO70343 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ppargc1aO70343 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ppargc1aO70343 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ppargc1aO70343 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ppargc1aO70343 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Ppargc1aO70343 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.7■■□□□ 1.7
Ppargc1aO70343 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ppargc1aO70343 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ppargc1aO70343 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Ppargc1aO70343 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
Ppargc1aO70343 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ppargc1aO70343 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.68■■□□□ 1.7
Ppargc1aO70343 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ppargc1aO70343 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ppargc1aO70343 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ppargc1aO70343 Amer2-203ENSMUST00000225247 2662 ntBASIC25.66■■□□□ 1.7
Ppargc1aO70343 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ppargc1aO70343 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.64■■□□□ 1.7
Ppargc1aO70343 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ppargc1aO70343 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.64■■□□□ 1.69
Ppargc1aO70343 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ppargc1aO70343 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.64■■□□□ 1.69
Ppargc1aO70343 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.63■■□□□ 1.69
Ppargc1aO70343 Gm24970-201ENSMUST00000175582 82 ntBASIC25.63■■□□□ 1.69
Ppargc1aO70343 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.63■■□□□ 1.69
Ppargc1aO70343 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ppargc1aO70343 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ppargc1aO70343 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ppargc1aO70343 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.62■■□□□ 1.69
Ppargc1aO70343 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ppargc1aO70343 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ppargc1aO70343 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ppargc1aO70343 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ppargc1aO70343 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ppargc1aO70343 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
Ppargc1aO70343 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.6■■□□□ 1.69
Ppargc1aO70343 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ppargc1aO70343 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ppargc1aO70343 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Ppargc1aO70343 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ppargc1aO70343 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Ppargc1aO70343 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ppargc1aO70343 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.57■■□□□ 1.68
Ppargc1aO70343 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ppargc1aO70343 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ppargc1aO70343 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ppargc1aO70343 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ppargc1aO70343 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ppargc1aO70343 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Ppargc1aO70343 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ppargc1aO70343 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Ppargc1aO70343 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.52■■□□□ 1.68
Ppargc1aO70343 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ppargc1aO70343 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ppargc1aO70343 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.52■■□□□ 1.68
Ppargc1aO70343 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Ppargc1aO70343 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.67
Ppargc1aO70343 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ppargc1aO70343 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.51■■□□□ 1.67
Ppargc1aO70343 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ppargc1aO70343 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.5■■□□□ 1.67
Ppargc1aO70343 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
Ppargc1aO70343 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.49■■□□□ 1.67
Ppargc1aO70343 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Ppargc1aO70343 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ppargc1aO70343 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
Ppargc1aO70343 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.47■■□□□ 1.67
Ppargc1aO70343 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ppargc1aO70343 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ppargc1aO70343 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Ppargc1aO70343 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.45■■□□□ 1.67
Ppargc1aO70343 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms