Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.49■■□□□ 1.35
Rdh5O55240 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.48■■□□□ 1.35
Rdh5O55240 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rdh5O55240 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rdh5O55240 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rdh5O55240 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rdh5O55240 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Rdh5O55240 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Rdh5O55240 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rdh5O55240 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.44■■□□□ 1.34
Rdh5O55240 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rdh5O55240 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rdh5O55240 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Rdh5O55240 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rdh5O55240 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rdh5O55240 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rdh5O55240 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rdh5O55240 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.4■■□□□ 1.34
Rdh5O55240 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rdh5O55240 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rdh5O55240 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rdh5O55240 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rdh5O55240 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rdh5O55240 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
Rdh5O55240 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rdh5O55240 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.38■■□□□ 1.33
Rdh5O55240 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rdh5O55240 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rdh5O55240 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rdh5O55240 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rdh5O55240 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.36■■□□□ 1.33
Rdh5O55240 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rdh5O55240 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.36■■□□□ 1.33
Rdh5O55240 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rdh5O55240 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.35■■□□□ 1.33
Rdh5O55240 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rdh5O55240 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
Rdh5O55240 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rdh5O55240 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rdh5O55240 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.32■■□□□ 1.32
Rdh5O55240 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
Rdh5O55240 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Rdh5O55240 Amer2-203ENSMUST00000225247 2662 ntBASIC23.31■■□□□ 1.32
Rdh5O55240 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.31■■□□□ 1.32
Rdh5O55240 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rdh5O55240 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.29■■□□□ 1.32
Rdh5O55240 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rdh5O55240 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rdh5O55240 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rdh5O55240 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rdh5O55240 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rdh5O55240 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rdh5O55240 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rdh5O55240 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rdh5O55240 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rdh5O55240 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rdh5O55240 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rdh5O55240 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rdh5O55240 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rdh5O55240 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.21■■□□□ 1.31
Rdh5O55240 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rdh5O55240 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rdh5O55240 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rdh5O55240 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rdh5O55240 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rdh5O55240 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rdh5O55240 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Rdh5O55240 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.18■■□□□ 1.3
Rdh5O55240 Gm45855-201ENSMUST00000212546 880 ntBASIC23.18■■□□□ 1.3
Rdh5O55240 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.18■■□□□ 1.3
Rdh5O55240 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
Rdh5O55240 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rdh5O55240 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rdh5O55240 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Rdh5O55240 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rdh5O55240 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.15■■□□□ 1.3
Rdh5O55240 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rdh5O55240 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rdh5O55240 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rdh5O55240 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Rdh5O55240 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rdh5O55240 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Rdh5O55240 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rdh5O55240 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Rdh5O55240 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rdh5O55240 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Rdh5O55240 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rdh5O55240 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rdh5O55240 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.1■■□□□ 1.29
Rdh5O55240 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.1■■□□□ 1.29
Rdh5O55240 Gm9397-201ENSMUST00000200125 605 ntBASIC23.1■■□□□ 1.29
Rdh5O55240 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.09■■□□□ 1.29
Rdh5O55240 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.09■■□□□ 1.29
Rdh5O55240 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rdh5O55240 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rdh5O55240 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.09■■□□□ 1.29
Rdh5O55240 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rdh5O55240 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rdh5O55240 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.08■■□□□ 1.29
Rdh5O55240 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms