Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh12O55134 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh12O55134 Gm45855-201ENSMUST00000212546 880 ntBASIC22.31■■□□□ 1.16
Pcdh12O55134 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh12O55134 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh12O55134 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.31■■□□□ 1.16
Pcdh12O55134 Amer2-203ENSMUST00000225247 2662 ntBASIC22.3■■□□□ 1.16
Pcdh12O55134 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh12O55134 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Pcdh12O55134 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdh12O55134 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.27■■□□□ 1.16
Pcdh12O55134 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh12O55134 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh12O55134 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh12O55134 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh12O55134 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh12O55134 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh12O55134 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh12O55134 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.22■■□□□ 1.15
Pcdh12O55134 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh12O55134 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh12O55134 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh12O55134 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh12O55134 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh12O55134 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdh12O55134 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdh12O55134 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.2■■□□□ 1.14
Pcdh12O55134 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdh12O55134 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Pcdh12O55134 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
Pcdh12O55134 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.18■■□□□ 1.14
Pcdh12O55134 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh12O55134 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh12O55134 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh12O55134 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh12O55134 Gm24970-201ENSMUST00000175582 82 ntBASIC22.16■■□□□ 1.14
Pcdh12O55134 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.16■■□□□ 1.14
Pcdh12O55134 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh12O55134 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.15■■□□□ 1.14
Pcdh12O55134 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Pcdh12O55134 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdh12O55134 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdh12O55134 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh12O55134 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.14■■□□□ 1.13
Pcdh12O55134 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh12O55134 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh12O55134 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh12O55134 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Pcdh12O55134 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh12O55134 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh12O55134 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh12O55134 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Pcdh12O55134 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Pcdh12O55134 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh12O55134 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh12O55134 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Pcdh12O55134 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh12O55134 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh12O55134 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.09■■□□□ 1.13
Pcdh12O55134 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
Pcdh12O55134 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh12O55134 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Pcdh12O55134 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh12O55134 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.07■■□□□ 1.12
Pcdh12O55134 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh12O55134 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Pcdh12O55134 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh12O55134 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh12O55134 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Pcdh12O55134 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.05■■□□□ 1.12
Pcdh12O55134 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdh12O55134 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.03■■□□□ 1.12
Pcdh12O55134 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh12O55134 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Pcdh12O55134 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdh12O55134 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
Pcdh12O55134 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdh12O55134 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdh12O55134 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22■■□□□ 1.11
Pcdh12O55134 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdh12O55134 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22■■□□□ 1.11
Pcdh12O55134 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdh12O55134 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdh12O55134 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdh12O55134 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh12O55134 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh12O55134 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh12O55134 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdh12O55134 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh12O55134 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh12O55134 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.98■■□□□ 1.11
Pcdh12O55134 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh12O55134 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Pcdh12O55134 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh12O55134 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh12O55134 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh12O55134 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdh12O55134 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdh12O55134 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdh12O55134 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 907.2 ms