Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.19■□□□□ 0.82
Tnfsf12O54907 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tnfsf12O54907 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf12O54907 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf12O54907 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Tnfsf12O54907 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tnfsf12O54907 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfsf12O54907 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf12O54907 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf12O54907 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf12O54907 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf12O54907 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfsf12O54907 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfsf12O54907 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfsf12O54907 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfsf12O54907 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfsf12O54907 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfsf12O54907 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Tnfsf12O54907 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfsf12O54907 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfsf12O54907 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfsf12O54907 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfsf12O54907 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfsf12O54907 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfsf12O54907 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfsf12O54907 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfsf12O54907 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfsf12O54907 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfsf12O54907 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfsf12O54907 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfsf12O54907 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.08■□□□□ 0.81
Tnfsf12O54907 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfsf12O54907 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfsf12O54907 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfsf12O54907 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tnfsf12O54907 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfsf12O54907 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfsf12O54907 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Tnfsf12O54907 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfsf12O54907 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.05■□□□□ 0.8
Tnfsf12O54907 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfsf12O54907 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfsf12O54907 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tnfsf12O54907 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfsf12O54907 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Tnfsf12O54907 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfsf12O54907 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfsf12O54907 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Tnfsf12O54907 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tnfsf12O54907 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.01■□□□□ 0.79
Tnfsf12O54907 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfsf12O54907 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfsf12O54907 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfsf12O54907 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfsf12O54907 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tnfsf12O54907 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20■□□□□ 0.79
Tnfsf12O54907 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfsf12O54907 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfsf12O54907 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfsf12O54907 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfsf12O54907 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfsf12O54907 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfsf12O54907 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.97■□□□□ 0.79
Tnfsf12O54907 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Tnfsf12O54907 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.96■□□□□ 0.79
Tnfsf12O54907 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfsf12O54907 Zfp131-205ENSMUST00000223812 663 ntBASIC19.95■□□□□ 0.78
Tnfsf12O54907 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfsf12O54907 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfsf12O54907 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.95■□□□□ 0.78
Tnfsf12O54907 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfsf12O54907 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfsf12O54907 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.93■□□□□ 0.78
Tnfsf12O54907 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfsf12O54907 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfsf12O54907 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfsf12O54907 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.91■□□□□ 0.78
Tnfsf12O54907 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfsf12O54907 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.9■□□□□ 0.78
Tnfsf12O54907 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.9■□□□□ 0.78
Tnfsf12O54907 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfsf12O54907 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfsf12O54907 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfsf12O54907 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfsf12O54907 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfsf12O54907 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfsf12O54907 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfsf12O54907 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfsf12O54907 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.88■□□□□ 0.77
Tnfsf12O54907 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf12O54907 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf12O54907 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Tnfsf12O54907 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf12O54907 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfsf12O54907 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfsf12O54907 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfsf12O54907 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfsf12O54907 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfsf12O54907 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfsf12O54907 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms