Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DffbO54788 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DffbO54788 Gm26115-201ENSMUST00000175605 87 ntBASIC21.1■□□□□ 0.97
DffbO54788 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DffbO54788 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DffbO54788 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
DffbO54788 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DffbO54788 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DffbO54788 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DffbO54788 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DffbO54788 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DffbO54788 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
DffbO54788 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
DffbO54788 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DffbO54788 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DffbO54788 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.04■□□□□ 0.96
DffbO54788 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DffbO54788 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DffbO54788 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
DffbO54788 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DffbO54788 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DffbO54788 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DffbO54788 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DffbO54788 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
DffbO54788 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DffbO54788 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DffbO54788 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DffbO54788 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21■□□□□ 0.95
DffbO54788 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21■□□□□ 0.95
DffbO54788 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DffbO54788 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DffbO54788 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DffbO54788 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DffbO54788 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DffbO54788 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DffbO54788 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
DffbO54788 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.96■□□□□ 0.95
DffbO54788 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.95■□□□□ 0.94
DffbO54788 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DffbO54788 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
DffbO54788 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DffbO54788 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DffbO54788 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DffbO54788 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DffbO54788 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DffbO54788 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DffbO54788 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DffbO54788 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
DffbO54788 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
DffbO54788 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DffbO54788 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.88■□□□□ 0.93
DffbO54788 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
DffbO54788 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
DffbO54788 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.87■□□□□ 0.93
DffbO54788 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DffbO54788 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DffbO54788 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DffbO54788 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DffbO54788 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DffbO54788 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DffbO54788 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
DffbO54788 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DffbO54788 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DffbO54788 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
DffbO54788 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
DffbO54788 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DffbO54788 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DffbO54788 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.81■□□□□ 0.92
DffbO54788 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DffbO54788 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DffbO54788 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DffbO54788 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DffbO54788 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DffbO54788 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
DffbO54788 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DffbO54788 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DffbO54788 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DffbO54788 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DffbO54788 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DffbO54788 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DffbO54788 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.91
DffbO54788 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DffbO54788 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DffbO54788 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DffbO54788 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DffbO54788 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DffbO54788 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
DffbO54788 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
DffbO54788 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
DffbO54788 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DffbO54788 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
DffbO54788 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DffbO54788 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.72■□□□□ 0.91
DffbO54788 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DffbO54788 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
DffbO54788 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
DffbO54788 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DffbO54788 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DffbO54788 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
DffbO54788 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 148.1 ms