Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.57■■□□□ 1.68
Ercc2O08811 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ercc2O08811 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ercc2O08811 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ercc2O08811 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Ercc2O08811 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ercc2O08811 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.55■■□□□ 1.68
Ercc2O08811 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ercc2O08811 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ercc2O08811 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ercc2O08811 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ercc2O08811 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.51■■□□□ 1.67
Ercc2O08811 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ercc2O08811 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.51■■□□□ 1.67
Ercc2O08811 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Ercc2O08811 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ercc2O08811 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.47■■□□□ 1.67
Ercc2O08811 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.47■■□□□ 1.67
Ercc2O08811 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Ercc2O08811 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ercc2O08811 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ercc2O08811 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ercc2O08811 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.43■■□□□ 1.66
Ercc2O08811 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ercc2O08811 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ercc2O08811 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ercc2O08811 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ercc2O08811 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ercc2O08811 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ercc2O08811 Gm9397-201ENSMUST00000200125 605 ntBASIC25.41■■□□□ 1.66
Ercc2O08811 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.41■■□□□ 1.66
Ercc2O08811 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
Ercc2O08811 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.4■■□□□ 1.66
Ercc2O08811 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ercc2O08811 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.4■■□□□ 1.66
Ercc2O08811 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
Ercc2O08811 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ercc2O08811 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ercc2O08811 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ercc2O08811 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.37■■□□□ 1.65
Ercc2O08811 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ercc2O08811 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ercc2O08811 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.36■■□□□ 1.65
Ercc2O08811 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.36■■□□□ 1.65
Ercc2O08811 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Ercc2O08811 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.33■■□□□ 1.65
Ercc2O08811 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Ercc2O08811 Gm45855-201ENSMUST00000212546 880 ntBASIC25.32■■□□□ 1.64
Ercc2O08811 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.31■■□□□ 1.64
Ercc2O08811 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
Ercc2O08811 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ercc2O08811 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.3■■□□□ 1.64
Ercc2O08811 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.3■■□□□ 1.64
Ercc2O08811 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ercc2O08811 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ercc2O08811 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ercc2O08811 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ercc2O08811 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ercc2O08811 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ercc2O08811 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
Ercc2O08811 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ercc2O08811 Gm24970-201ENSMUST00000175582 82 ntBASIC25.25■■□□□ 1.63
Ercc2O08811 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ercc2O08811 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Ercc2O08811 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.24■■□□□ 1.63
Ercc2O08811 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ercc2O08811 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.23■■□□□ 1.63
Ercc2O08811 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ercc2O08811 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
Ercc2O08811 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ercc2O08811 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.22■■□□□ 1.63
Ercc2O08811 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ercc2O08811 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ercc2O08811 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.19■■□□□ 1.62
Ercc2O08811 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Ercc2O08811 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ercc2O08811 Amer2-203ENSMUST00000225247 2662 ntBASIC25.19■■□□□ 1.62
Ercc2O08811 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ercc2O08811 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ercc2O08811 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.18■■□□□ 1.62
Ercc2O08811 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ercc2O08811 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.18■■□□□ 1.62
Ercc2O08811 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ercc2O08811 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ercc2O08811 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ercc2O08811 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.17■■□□□ 1.62
Ercc2O08811 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ercc2O08811 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ercc2O08811 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ercc2O08811 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ercc2O08811 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ercc2O08811 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
Ercc2O08811 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Ercc2O08811 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ercc2O08811 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ercc2O08811 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ercc2O08811 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
Ercc2O08811 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ercc2O08811 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ercc2O08811 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms