Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2al1kJ3QP08 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2al1kJ3QP08 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2al1kJ3QP08 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2al1kJ3QP08 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2al1kJ3QP08 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2al1kJ3QP08 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2al1kJ3QP08 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
H2al1kJ3QP08 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2al1kJ3QP08 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
H2al1kJ3QP08 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
H2al1kJ3QP08 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
H2al1kJ3QP08 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2al1kJ3QP08 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H2al1kJ3QP08 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2al1kJ3QP08 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC14.51□□□□□ -0.09
H2al1kJ3QP08 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2al1kJ3QP08 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2al1kJ3QP08 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2al1kJ3QP08 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
H2al1kJ3QP08 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2al1kJ3QP08 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
H2al1kJ3QP08 Fezf2-202ENSMUST00000224023 1917 ntBASIC14.49□□□□□ -0.09
H2al1kJ3QP08 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2al1kJ3QP08 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2al1kJ3QP08 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC14.48□□□□□ -0.09
H2al1kJ3QP08 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC14.47□□□□□ -0.09
H2al1kJ3QP08 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
H2al1kJ3QP08 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2al1kJ3QP08 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2al1kJ3QP08 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
H2al1kJ3QP08 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2al1kJ3QP08 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2al1kJ3QP08 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2al1kJ3QP08 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
H2al1kJ3QP08 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2al1kJ3QP08 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H2al1kJ3QP08 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2al1kJ3QP08 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
H2al1kJ3QP08 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2al1kJ3QP08 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2al1kJ3QP08 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2al1kJ3QP08 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2al1kJ3QP08 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2al1kJ3QP08 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2al1kJ3QP08 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
H2al1kJ3QP08 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC14.42□□□□□ -0.1
H2al1kJ3QP08 Notumos-201ENSMUST00000151998 2659 ntBASIC14.41□□□□□ -0.1
H2al1kJ3QP08 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2al1kJ3QP08 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2al1kJ3QP08 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
H2al1kJ3QP08 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
H2al1kJ3QP08 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2al1kJ3QP08 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2al1kJ3QP08 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2al1kJ3QP08 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
H2al1kJ3QP08 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC14.4□□□□□ -0.1
H2al1kJ3QP08 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2al1kJ3QP08 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
H2al1kJ3QP08 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2al1kJ3QP08 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
H2al1kJ3QP08 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2al1kJ3QP08 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2al1kJ3QP08 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2al1kJ3QP08 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2al1kJ3QP08 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2al1kJ3QP08 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2al1kJ3QP08 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2al1kJ3QP08 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2al1kJ3QP08 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.37□□□□□ -0.11
H2al1kJ3QP08 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2al1kJ3QP08 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2al1kJ3QP08 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2al1kJ3QP08 Gm2415-204ENSMUST00000190235 2004 ntBASIC14.36□□□□□ -0.11
H2al1kJ3QP08 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2al1kJ3QP08 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2al1kJ3QP08 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2al1kJ3QP08 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC14.35□□□□□ -0.11
H2al1kJ3QP08 AC124392.1-201ENSMUST00000225172 5324 ntBASIC14.34□□□□□ -0.11
H2al1kJ3QP08 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2al1kJ3QP08 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2al1kJ3QP08 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2al1kJ3QP08 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
H2al1kJ3QP08 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2al1kJ3QP08 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
H2al1kJ3QP08 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2al1kJ3QP08 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2al1kJ3QP08 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2al1kJ3QP08 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2al1kJ3QP08 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2al1kJ3QP08 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
H2al1kJ3QP08 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2al1kJ3QP08 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC14.31□□□□□ -0.12
H2al1kJ3QP08 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2al1kJ3QP08 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H2al1kJ3QP08 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2al1kJ3QP08 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2al1kJ3QP08 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2al1kJ3QP08 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
H2al1kJ3QP08 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms