Protein–RNA interactions for Protein: J3QK55

2010315B03Rik, RIKEN cDNA 2010315B03 gene, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2010315B03RikJ3QK55 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
2010315B03RikJ3QK55 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
2010315B03RikJ3QK55 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
2010315B03RikJ3QK55 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
2010315B03RikJ3QK55 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
2010315B03RikJ3QK55 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
2010315B03RikJ3QK55 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
2010315B03RikJ3QK55 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.88■■□□□ 1.09
2010315B03RikJ3QK55 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
2010315B03RikJ3QK55 Zxda-201ENSMUST00000117281 2621 ntBASIC21.87■■□□□ 1.09
2010315B03RikJ3QK55 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
2010315B03RikJ3QK55 Gm24970-201ENSMUST00000175582 82 ntBASIC21.84■■□□□ 1.09
2010315B03RikJ3QK55 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.84■■□□□ 1.09
2010315B03RikJ3QK55 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
2010315B03RikJ3QK55 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.83■■□□□ 1.09
2010315B03RikJ3QK55 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
2010315B03RikJ3QK55 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
2010315B03RikJ3QK55 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
2010315B03RikJ3QK55 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
2010315B03RikJ3QK55 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
2010315B03RikJ3QK55 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.81■■□□□ 1.08
2010315B03RikJ3QK55 Gm45855-201ENSMUST00000212546 880 ntBASIC21.81■■□□□ 1.08
2010315B03RikJ3QK55 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.8■■□□□ 1.08
2010315B03RikJ3QK55 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
2010315B03RikJ3QK55 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
2010315B03RikJ3QK55 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
2010315B03RikJ3QK55 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.79■■□□□ 1.08
2010315B03RikJ3QK55 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
2010315B03RikJ3QK55 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.78■■□□□ 1.08
2010315B03RikJ3QK55 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
2010315B03RikJ3QK55 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
2010315B03RikJ3QK55 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
2010315B03RikJ3QK55 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
2010315B03RikJ3QK55 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
2010315B03RikJ3QK55 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
2010315B03RikJ3QK55 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
2010315B03RikJ3QK55 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
2010315B03RikJ3QK55 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
2010315B03RikJ3QK55 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
2010315B03RikJ3QK55 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
2010315B03RikJ3QK55 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.73■■□□□ 1.07
2010315B03RikJ3QK55 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
2010315B03RikJ3QK55 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.72■■□□□ 1.07
2010315B03RikJ3QK55 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
2010315B03RikJ3QK55 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.71■■□□□ 1.07
2010315B03RikJ3QK55 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
2010315B03RikJ3QK55 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
2010315B03RikJ3QK55 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
2010315B03RikJ3QK55 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
2010315B03RikJ3QK55 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.7■■□□□ 1.06
2010315B03RikJ3QK55 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
2010315B03RikJ3QK55 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.7■■□□□ 1.06
2010315B03RikJ3QK55 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.7■■□□□ 1.06
2010315B03RikJ3QK55 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
2010315B03RikJ3QK55 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
2010315B03RikJ3QK55 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.67■■□□□ 1.06
2010315B03RikJ3QK55 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
2010315B03RikJ3QK55 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.67■■□□□ 1.06
2010315B03RikJ3QK55 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
2010315B03RikJ3QK55 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
2010315B03RikJ3QK55 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.64■■□□□ 1.05
2010315B03RikJ3QK55 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
2010315B03RikJ3QK55 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
2010315B03RikJ3QK55 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
2010315B03RikJ3QK55 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
2010315B03RikJ3QK55 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.63■■□□□ 1.05
2010315B03RikJ3QK55 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
2010315B03RikJ3QK55 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.62■■□□□ 1.05
2010315B03RikJ3QK55 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
2010315B03RikJ3QK55 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.61■■□□□ 1.05
2010315B03RikJ3QK55 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.61■■□□□ 1.05
2010315B03RikJ3QK55 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
2010315B03RikJ3QK55 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
2010315B03RikJ3QK55 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
2010315B03RikJ3QK55 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
2010315B03RikJ3QK55 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.59■■□□□ 1.05
2010315B03RikJ3QK55 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
2010315B03RikJ3QK55 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
2010315B03RikJ3QK55 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.58■■□□□ 1.05
2010315B03RikJ3QK55 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
2010315B03RikJ3QK55 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
2010315B03RikJ3QK55 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
2010315B03RikJ3QK55 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
2010315B03RikJ3QK55 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
2010315B03RikJ3QK55 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
2010315B03RikJ3QK55 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
2010315B03RikJ3QK55 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
2010315B03RikJ3QK55 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
2010315B03RikJ3QK55 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
2010315B03RikJ3QK55 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
2010315B03RikJ3QK55 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.52■■□□□ 1.04
2010315B03RikJ3QK55 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
2010315B03RikJ3QK55 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
2010315B03RikJ3QK55 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
2010315B03RikJ3QK55 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
2010315B03RikJ3QK55 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
2010315B03RikJ3QK55 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
2010315B03RikJ3QK55 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.5■■□□□ 1.03
2010315B03RikJ3QK55 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
2010315B03RikJ3QK55 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms