Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Atf6F6VAN0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Atf6F6VAN0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
Atf6F6VAN0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Atf6F6VAN0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Atf6F6VAN0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Atf6F6VAN0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Atf6F6VAN0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.44■■□□□ 1.66
Atf6F6VAN0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Atf6F6VAN0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.43■■□□□ 1.66
Atf6F6VAN0 Amer2-203ENSMUST00000225247 2662 ntBASIC25.43■■□□□ 1.66
Atf6F6VAN0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Atf6F6VAN0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Atf6F6VAN0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Atf6F6VAN0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Atf6F6VAN0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Atf6F6VAN0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.4■■□□□ 1.66
Atf6F6VAN0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.4■■□□□ 1.66
Atf6F6VAN0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Atf6F6VAN0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Atf6F6VAN0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Atf6F6VAN0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Atf6F6VAN0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Atf6F6VAN0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Atf6F6VAN0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Atf6F6VAN0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Atf6F6VAN0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Atf6F6VAN0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Atf6F6VAN0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Atf6F6VAN0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Atf6F6VAN0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.35■■□□□ 1.65
Atf6F6VAN0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Atf6F6VAN0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
Atf6F6VAN0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Atf6F6VAN0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.32■■□□□ 1.64
Atf6F6VAN0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Atf6F6VAN0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Atf6F6VAN0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Atf6F6VAN0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Atf6F6VAN0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.29■■□□□ 1.64
Atf6F6VAN0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Atf6F6VAN0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Atf6F6VAN0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Atf6F6VAN0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Atf6F6VAN0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.27■■□□□ 1.64
Atf6F6VAN0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Atf6F6VAN0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Atf6F6VAN0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Atf6F6VAN0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Atf6F6VAN0 Zfp131-205ENSMUST00000223812 663 ntBASIC25.25■■□□□ 1.63
Atf6F6VAN0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Atf6F6VAN0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.23■■□□□ 1.63
Atf6F6VAN0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Atf6F6VAN0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Atf6F6VAN0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.2■■□□□ 1.62
Atf6F6VAN0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Atf6F6VAN0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Atf6F6VAN0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Atf6F6VAN0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Atf6F6VAN0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Atf6F6VAN0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Atf6F6VAN0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Atf6F6VAN0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Atf6F6VAN0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Atf6F6VAN0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Atf6F6VAN0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.15■■□□□ 1.62
Atf6F6VAN0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Atf6F6VAN0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.14■■□□□ 1.62
Atf6F6VAN0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Atf6F6VAN0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Atf6F6VAN0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Atf6F6VAN0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.12■■□□□ 1.61
Atf6F6VAN0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Atf6F6VAN0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Atf6F6VAN0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Atf6F6VAN0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Atf6F6VAN0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
Atf6F6VAN0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Atf6F6VAN0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Atf6F6VAN0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.09■■□□□ 1.61
Atf6F6VAN0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Atf6F6VAN0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Atf6F6VAN0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Atf6F6VAN0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.07■■□□□ 1.6
Atf6F6VAN0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Atf6F6VAN0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atf6F6VAN0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.06■■□□□ 1.6
Atf6F6VAN0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atf6F6VAN0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atf6F6VAN0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Atf6F6VAN0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Atf6F6VAN0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.05■■□□□ 1.6
Atf6F6VAN0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Atf6F6VAN0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Atf6F6VAN0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
Atf6F6VAN0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Atf6F6VAN0 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.03■■□□□ 1.6
Atf6F6VAN0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.03■■□□□ 1.6
Atf6F6VAN0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Atf6F6VAN0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.02■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms