Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.18■□□□□ 0.98
Cpsf4lE9Q2N0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cpsf4lE9Q2N0 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.17■□□□□ 0.98
Cpsf4lE9Q2N0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf4lE9Q2N0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4lE9Q2N0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4lE9Q2N0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4lE9Q2N0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.15■□□□□ 0.98
Cpsf4lE9Q2N0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cpsf4lE9Q2N0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpsf4lE9Q2N0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.14■□□□□ 0.97
Cpsf4lE9Q2N0 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.13■□□□□ 0.97
Cpsf4lE9Q2N0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cpsf4lE9Q2N0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.13■□□□□ 0.97
Cpsf4lE9Q2N0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4lE9Q2N0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4lE9Q2N0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf4lE9Q2N0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.11■□□□□ 0.97
Cpsf4lE9Q2N0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4lE9Q2N0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cpsf4lE9Q2N0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Cpsf4lE9Q2N0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4lE9Q2N0 Gm9397-201ENSMUST00000200125 605 ntBASIC21.09■□□□□ 0.97
Cpsf4lE9Q2N0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4lE9Q2N0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf4lE9Q2N0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpsf4lE9Q2N0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf4lE9Q2N0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.06■□□□□ 0.96
Cpsf4lE9Q2N0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cpsf4lE9Q2N0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpsf4lE9Q2N0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.05■□□□□ 0.96
Cpsf4lE9Q2N0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Cpsf4lE9Q2N0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.05■□□□□ 0.96
Cpsf4lE9Q2N0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf4lE9Q2N0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf4lE9Q2N0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf4lE9Q2N0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf4lE9Q2N0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf4lE9Q2N0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.04■□□□□ 0.96
Cpsf4lE9Q2N0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf4lE9Q2N0 Gm45855-201ENSMUST00000212546 880 ntBASIC21.03■□□□□ 0.96
Cpsf4lE9Q2N0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.02■□□□□ 0.96
Cpsf4lE9Q2N0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf4lE9Q2N0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.01■□□□□ 0.95
Cpsf4lE9Q2N0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf4lE9Q2N0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cpsf4lE9Q2N0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21■□□□□ 0.95
Cpsf4lE9Q2N0 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.99■□□□□ 0.95
Cpsf4lE9Q2N0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf4lE9Q2N0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf4lE9Q2N0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf4lE9Q2N0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.98■□□□□ 0.95
Cpsf4lE9Q2N0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf4lE9Q2N0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf4lE9Q2N0 Gm24970-201ENSMUST00000175582 82 ntBASIC20.96■□□□□ 0.95
Cpsf4lE9Q2N0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.95■□□□□ 0.94
Cpsf4lE9Q2N0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf4lE9Q2N0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Cpsf4lE9Q2N0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf4lE9Q2N0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Cpsf4lE9Q2N0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.94■□□□□ 0.94
Cpsf4lE9Q2N0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cpsf4lE9Q2N0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf4lE9Q2N0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Cpsf4lE9Q2N0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.93■□□□□ 0.94
Cpsf4lE9Q2N0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf4lE9Q2N0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf4lE9Q2N0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf4lE9Q2N0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.92■□□□□ 0.94
Cpsf4lE9Q2N0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf4lE9Q2N0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.91■□□□□ 0.94
Cpsf4lE9Q2N0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.91■□□□□ 0.94
Cpsf4lE9Q2N0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf4lE9Q2N0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf4lE9Q2N0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf4lE9Q2N0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf4lE9Q2N0 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.89■□□□□ 0.93
Cpsf4lE9Q2N0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf4lE9Q2N0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf4lE9Q2N0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf4lE9Q2N0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf4lE9Q2N0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf4lE9Q2N0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Cpsf4lE9Q2N0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf4lE9Q2N0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf4lE9Q2N0 Amer2-203ENSMUST00000225247 2662 ntBASIC20.85■□□□□ 0.93
Cpsf4lE9Q2N0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf4lE9Q2N0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf4lE9Q2N0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf4lE9Q2N0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf4lE9Q2N0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
Cpsf4lE9Q2N0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf4lE9Q2N0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.84■□□□□ 0.93
Cpsf4lE9Q2N0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf4lE9Q2N0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf4lE9Q2N0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Cpsf4lE9Q2N0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cpsf4lE9Q2N0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf4lE9Q2N0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf4lE9Q2N0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms