Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rfx8D3YU81 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rfx8D3YU81 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Rfx8D3YU81 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.23■■□□□ 1.79
Rfx8D3YU81 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rfx8D3YU81 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rfx8D3YU81 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rfx8D3YU81 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rfx8D3YU81 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rfx8D3YU81 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Rfx8D3YU81 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Rfx8D3YU81 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Rfx8D3YU81 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Rfx8D3YU81 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
Rfx8D3YU81 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rfx8D3YU81 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rfx8D3YU81 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.18■■□□□ 1.78
Rfx8D3YU81 Gm9397-201ENSMUST00000200125 605 ntBASIC26.18■■□□□ 1.78
Rfx8D3YU81 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
Rfx8D3YU81 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rfx8D3YU81 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Rfx8D3YU81 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rfx8D3YU81 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rfx8D3YU81 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rfx8D3YU81 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Rfx8D3YU81 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.13■■□□□ 1.77
Rfx8D3YU81 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Rfx8D3YU81 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rfx8D3YU81 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rfx8D3YU81 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Rfx8D3YU81 Gm45855-201ENSMUST00000212546 880 ntBASIC26.12■■□□□ 1.77
Rfx8D3YU81 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rfx8D3YU81 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rfx8D3YU81 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rfx8D3YU81 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rfx8D3YU81 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.09■■□□□ 1.77
Rfx8D3YU81 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rfx8D3YU81 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Rfx8D3YU81 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rfx8D3YU81 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rfx8D3YU81 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.06■■□□□ 1.76
Rfx8D3YU81 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Rfx8D3YU81 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rfx8D3YU81 Gm24970-201ENSMUST00000175582 82 ntBASIC26.05■■□□□ 1.76
Rfx8D3YU81 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rfx8D3YU81 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rfx8D3YU81 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.02■■□□□ 1.76
Rfx8D3YU81 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
Rfx8D3YU81 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.01■■□□□ 1.75
Rfx8D3YU81 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rfx8D3YU81 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Rfx8D3YU81 Gm43863-201ENSMUST00000203822 1192 ntBASIC26■■□□□ 1.75
Rfx8D3YU81 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rfx8D3YU81 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rfx8D3YU81 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rfx8D3YU81 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rfx8D3YU81 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.97■■□□□ 1.75
Rfx8D3YU81 Amer2-203ENSMUST00000225247 2662 ntBASIC25.96■■□□□ 1.75
Rfx8D3YU81 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
Rfx8D3YU81 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Rfx8D3YU81 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Rfx8D3YU81 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Rfx8D3YU81 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Rfx8D3YU81 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Rfx8D3YU81 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rfx8D3YU81 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rfx8D3YU81 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rfx8D3YU81 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Rfx8D3YU81 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.92■■□□□ 1.74
Rfx8D3YU81 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rfx8D3YU81 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.91■■□□□ 1.74
Rfx8D3YU81 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
Rfx8D3YU81 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Rfx8D3YU81 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Rfx8D3YU81 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.89■■□□□ 1.74
Rfx8D3YU81 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rfx8D3YU81 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Rfx8D3YU81 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Rfx8D3YU81 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Rfx8D3YU81 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rfx8D3YU81 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Rfx8D3YU81 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
Rfx8D3YU81 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.86■■□□□ 1.73
Rfx8D3YU81 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.86■■□□□ 1.73
Rfx8D3YU81 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rfx8D3YU81 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rfx8D3YU81 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Rfx8D3YU81 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rfx8D3YU81 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rfx8D3YU81 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rfx8D3YU81 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.83■■□□□ 1.73
Rfx8D3YU81 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.82■■□□□ 1.72
Rfx8D3YU81 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.82■■□□□ 1.72
Rfx8D3YU81 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Rfx8D3YU81 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
Rfx8D3YU81 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rfx8D3YU81 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.79■■□□□ 1.72
Rfx8D3YU81 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rfx8D3YU81 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rfx8D3YU81 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 1169.5 ms