Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Gm11127A7VMS2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Gm11127A7VMS2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm11127A7VMS2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.64■■□□□ 1.06
Gm11127A7VMS2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Gm11127A7VMS2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm11127A7VMS2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm11127A7VMS2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm11127A7VMS2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm11127A7VMS2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm11127A7VMS2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm11127A7VMS2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm11127A7VMS2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Gm11127A7VMS2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm11127A7VMS2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Gm11127A7VMS2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm11127A7VMS2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm11127A7VMS2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.54■■□□□ 1.04
Gm11127A7VMS2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm11127A7VMS2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Gm11127A7VMS2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm11127A7VMS2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm11127A7VMS2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gm11127A7VMS2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm11127A7VMS2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm11127A7VMS2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Gm11127A7VMS2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Gm11127A7VMS2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm11127A7VMS2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm11127A7VMS2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gm11127A7VMS2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm11127A7VMS2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm11127A7VMS2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm11127A7VMS2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gm11127A7VMS2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.48■■□□□ 1.03
Gm11127A7VMS2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gm11127A7VMS2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.47■■□□□ 1.03
Gm11127A7VMS2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Gm11127A7VMS2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm11127A7VMS2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gm11127A7VMS2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm11127A7VMS2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Gm11127A7VMS2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gm11127A7VMS2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.46■■□□□ 1.03
Gm11127A7VMS2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Gm11127A7VMS2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Gm11127A7VMS2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm11127A7VMS2 Peli2-204ENSMUST00000226513 1320 ntBASIC21.45■■□□□ 1.02
Gm11127A7VMS2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm11127A7VMS2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm11127A7VMS2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.43■■□□□ 1.02
Gm11127A7VMS2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Gm11127A7VMS2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Gm11127A7VMS2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm11127A7VMS2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.41■■□□□ 1.02
Gm11127A7VMS2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
Gm11127A7VMS2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.4■■□□□ 1.02
Gm11127A7VMS2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Gm11127A7VMS2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm11127A7VMS2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm11127A7VMS2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm11127A7VMS2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.02
Gm11127A7VMS2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.39■■□□□ 1.01
Gm11127A7VMS2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11127A7VMS2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11127A7VMS2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11127A7VMS2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Gm11127A7VMS2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11127A7VMS2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11127A7VMS2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Gm11127A7VMS2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11127A7VMS2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11127A7VMS2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11127A7VMS2 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.34■■□□□ 1.01
Gm11127A7VMS2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11127A7VMS2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm11127A7VMS2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm11127A7VMS2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm11127A7VMS2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Gm11127A7VMS2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm11127A7VMS2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11127A7VMS2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11127A7VMS2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11127A7VMS2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.29■■□□□ 1
Gm11127A7VMS2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm11127A7VMS2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Gm11127A7VMS2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm11127A7VMS2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11127A7VMS2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11127A7VMS2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm11127A7VMS2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Gm11127A7VMS2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm11127A7VMS2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm11127A7VMS2 Gm24804-201ENSMUST00000174982 85 ntBASIC21.25■□□□□ 0.99
Gm11127A7VMS2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
Gm11127A7VMS2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm11127A7VMS2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Gm11127A7VMS2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm11127A7VMS2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm11127A7VMS2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms