Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubr4A2AN08 Zfp131-207ENSMUST00000224946 1783 ntBASIC13.97□□□□□ -0.17
Ubr4A2AN08 Gm5812-201ENSMUST00000061073 957 ntBASIC13.96□□□□□ -0.17
Ubr4A2AN08 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ubr4A2AN08 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubr4A2AN08 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr4A2AN08 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr4A2AN08 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC13.95□□□□□ -0.18
Ubr4A2AN08 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr4A2AN08 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr4A2AN08 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr4A2AN08 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr4A2AN08 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubr4A2AN08 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubr4A2AN08 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ubr4A2AN08 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.92□□□□□ -0.18
Ubr4A2AN08 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ubr4A2AN08 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC13.91□□□□□ -0.18
Ubr4A2AN08 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ubr4A2AN08 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ubr4A2AN08 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ubr4A2AN08 Mipep-204ENSMUST00000225043 1548 ntBASIC13.9□□□□□ -0.18
Ubr4A2AN08 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Ubr4A2AN08 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubr4A2AN08 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubr4A2AN08 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.88□□□□□ -0.19
Ubr4A2AN08 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ubr4A2AN08 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubr4A2AN08 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubr4A2AN08 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubr4A2AN08 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ubr4A2AN08 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubr4A2AN08 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
Ubr4A2AN08 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ubr4A2AN08 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Ubr4A2AN08 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubr4A2AN08 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Ubr4A2AN08 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.83□□□□□ -0.2
Ubr4A2AN08 Gm12366-201ENSMUST00000121722 873 ntBASIC13.83□□□□□ -0.2
Ubr4A2AN08 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubr4A2AN08 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ubr4A2AN08 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubr4A2AN08 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.83□□□□□ -0.2
Ubr4A2AN08 Gm5786-201ENSMUST00000085368 882 ntBASIC13.83□□□□□ -0.2
Ubr4A2AN08 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubr4A2AN08 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubr4A2AN08 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.81□□□□□ -0.2
Ubr4A2AN08 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ubr4A2AN08 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubr4A2AN08 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubr4A2AN08 Gm6311-201ENSMUST00000073790 878 ntBASIC13.81□□□□□ -0.2
Ubr4A2AN08 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubr4A2AN08 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubr4A2AN08 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubr4A2AN08 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC13.79□□□□□ -0.2
Ubr4A2AN08 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ubr4A2AN08 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubr4A2AN08 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubr4A2AN08 Gm4799-201ENSMUST00000095396 657 ntBASIC13.78□□□□□ -0.2
Ubr4A2AN08 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubr4A2AN08 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubr4A2AN08 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubr4A2AN08 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubr4A2AN08 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubr4A2AN08 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ubr4A2AN08 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Ubr4A2AN08 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ubr4A2AN08 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.75□□□□□ -0.21
Ubr4A2AN08 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.75□□□□□ -0.21
Ubr4A2AN08 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC13.74□□□□□ -0.21
Ubr4A2AN08 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC13.74□□□□□ -0.21
Ubr4A2AN08 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC13.74□□□□□ -0.21
Ubr4A2AN08 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.74□□□□□ -0.21
Ubr4A2AN08 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC13.73□□□□□ -0.21
Ubr4A2AN08 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ubr4A2AN08 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.73□□□□□ -0.21
Ubr4A2AN08 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ubr4A2AN08 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubr4A2AN08 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ubr4A2AN08 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC13.71□□□□□ -0.21
Ubr4A2AN08 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ubr4A2AN08 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ubr4A2AN08 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.7□□□□□ -0.22
Ubr4A2AN08 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubr4A2AN08 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ubr4A2AN08 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.7□□□□□ -0.22
Ubr4A2AN08 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.7□□□□□ -0.22
Ubr4A2AN08 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubr4A2AN08 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.69□□□□□ -0.22
Ubr4A2AN08 AC167019.3-201ENSMUST00000228225 1266 ntBASIC13.69□□□□□ -0.22
Ubr4A2AN08 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms