Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Pcna-ps2A0A140T8V5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcna-ps2A0A140T8V5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.66■■□□□ 1.54
Pcna-ps2A0A140T8V5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.66■■□□□ 1.54
Pcna-ps2A0A140T8V5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Pcna-ps2A0A140T8V5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.66■■□□□ 1.54
Pcna-ps2A0A140T8V5 Zfp131-205ENSMUST00000223812 663 ntBASIC24.66■■□□□ 1.54
Pcna-ps2A0A140T8V5 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.66■■□□□ 1.54
Pcna-ps2A0A140T8V5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcna-ps2A0A140T8V5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Pcna-ps2A0A140T8V5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Pcna-ps2A0A140T8V5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Pcna-ps2A0A140T8V5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Pcna-ps2A0A140T8V5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcna-ps2A0A140T8V5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Pcna-ps2A0A140T8V5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcna-ps2A0A140T8V5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcna-ps2A0A140T8V5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcna-ps2A0A140T8V5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcna-ps2A0A140T8V5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcna-ps2A0A140T8V5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Pcna-ps2A0A140T8V5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcna-ps2A0A140T8V5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcna-ps2A0A140T8V5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.58■■□□□ 1.53
Pcna-ps2A0A140T8V5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcna-ps2A0A140T8V5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcna-ps2A0A140T8V5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcna-ps2A0A140T8V5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcna-ps2A0A140T8V5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcna-ps2A0A140T8V5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.56■■□□□ 1.52
Pcna-ps2A0A140T8V5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcna-ps2A0A140T8V5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcna-ps2A0A140T8V5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.55■■□□□ 1.52
Pcna-ps2A0A140T8V5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
Pcna-ps2A0A140T8V5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcna-ps2A0A140T8V5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Pcna-ps2A0A140T8V5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcna-ps2A0A140T8V5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Pcna-ps2A0A140T8V5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.52■■□□□ 1.52
Pcna-ps2A0A140T8V5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pcna-ps2A0A140T8V5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pcna-ps2A0A140T8V5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.52■■□□□ 1.52
Pcna-ps2A0A140T8V5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.51■■□□□ 1.51
Pcna-ps2A0A140T8V5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcna-ps2A0A140T8V5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcna-ps2A0A140T8V5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcna-ps2A0A140T8V5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcna-ps2A0A140T8V5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcna-ps2A0A140T8V5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcna-ps2A0A140T8V5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Pcna-ps2A0A140T8V5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcna-ps2A0A140T8V5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcna-ps2A0A140T8V5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcna-ps2A0A140T8V5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pcna-ps2A0A140T8V5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcna-ps2A0A140T8V5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcna-ps2A0A140T8V5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcna-ps2A0A140T8V5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcna-ps2A0A140T8V5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcna-ps2A0A140T8V5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcna-ps2A0A140T8V5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcna-ps2A0A140T8V5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcna-ps2A0A140T8V5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.41■■□□□ 1.5
Pcna-ps2A0A140T8V5 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.41■■□□□ 1.5
Pcna-ps2A0A140T8V5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.41■■□□□ 1.5
Pcna-ps2A0A140T8V5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcna-ps2A0A140T8V5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcna-ps2A0A140T8V5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Pcna-ps2A0A140T8V5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcna-ps2A0A140T8V5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Pcna-ps2A0A140T8V5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcna-ps2A0A140T8V5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcna-ps2A0A140T8V5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcna-ps2A0A140T8V5 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.38■■□□□ 1.49
Pcna-ps2A0A140T8V5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcna-ps2A0A140T8V5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcna-ps2A0A140T8V5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcna-ps2A0A140T8V5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcna-ps2A0A140T8V5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcna-ps2A0A140T8V5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.35■■□□□ 1.49
Pcna-ps2A0A140T8V5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcna-ps2A0A140T8V5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Pcna-ps2A0A140T8V5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcna-ps2A0A140T8V5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Pcna-ps2A0A140T8V5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcna-ps2A0A140T8V5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcna-ps2A0A140T8V5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcna-ps2A0A140T8V5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.3■■□□□ 1.48
Pcna-ps2A0A140T8V5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcna-ps2A0A140T8V5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.29■■□□□ 1.48
Pcna-ps2A0A140T8V5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcna-ps2A0A140T8V5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.28■■□□□ 1.48
Pcna-ps2A0A140T8V5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcna-ps2A0A140T8V5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcna-ps2A0A140T8V5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.26■■□□□ 1.47
Pcna-ps2A0A140T8V5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Pcna-ps2A0A140T8V5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Pcna-ps2A0A140T8V5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.25■■□□□ 1.47
Pcna-ps2A0A140T8V5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcna-ps2A0A140T8V5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms