Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv5A0A0B4J1G9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv5A0A0B4J1G9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.81■□□□□ 0.76
Trbv5A0A0B4J1G9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv5A0A0B4J1G9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv5A0A0B4J1G9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv5A0A0B4J1G9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv5A0A0B4J1G9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv5A0A0B4J1G9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trbv5A0A0B4J1G9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv5A0A0B4J1G9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv5A0A0B4J1G9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trbv5A0A0B4J1G9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trbv5A0A0B4J1G9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.76■□□□□ 0.75
Trbv5A0A0B4J1G9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv5A0A0B4J1G9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv5A0A0B4J1G9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv5A0A0B4J1G9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv5A0A0B4J1G9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv5A0A0B4J1G9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv5A0A0B4J1G9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Trbv5A0A0B4J1G9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv5A0A0B4J1G9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trbv5A0A0B4J1G9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv5A0A0B4J1G9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv5A0A0B4J1G9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Trbv5A0A0B4J1G9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv5A0A0B4J1G9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv5A0A0B4J1G9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv5A0A0B4J1G9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv5A0A0B4J1G9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv5A0A0B4J1G9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv5A0A0B4J1G9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv5A0A0B4J1G9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv5A0A0B4J1G9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.67■□□□□ 0.74
Trbv5A0A0B4J1G9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv5A0A0B4J1G9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv5A0A0B4J1G9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv5A0A0B4J1G9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
Trbv5A0A0B4J1G9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.65■□□□□ 0.74
Trbv5A0A0B4J1G9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv5A0A0B4J1G9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv5A0A0B4J1G9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv5A0A0B4J1G9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv5A0A0B4J1G9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv5A0A0B4J1G9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trbv5A0A0B4J1G9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv5A0A0B4J1G9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv5A0A0B4J1G9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv5A0A0B4J1G9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv5A0A0B4J1G9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv5A0A0B4J1G9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.6■□□□□ 0.73
Trbv5A0A0B4J1G9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.6■□□□□ 0.73
Trbv5A0A0B4J1G9 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.6■□□□□ 0.73
Trbv5A0A0B4J1G9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv5A0A0B4J1G9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv5A0A0B4J1G9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.6■□□□□ 0.73
Trbv5A0A0B4J1G9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv5A0A0B4J1G9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv5A0A0B4J1G9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.58■□□□□ 0.73
Trbv5A0A0B4J1G9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trbv5A0A0B4J1G9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trbv5A0A0B4J1G9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv5A0A0B4J1G9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
Trbv5A0A0B4J1G9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv5A0A0B4J1G9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv5A0A0B4J1G9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trbv5A0A0B4J1G9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv5A0A0B4J1G9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv5A0A0B4J1G9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv5A0A0B4J1G9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv5A0A0B4J1G9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv5A0A0B4J1G9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv5A0A0B4J1G9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trbv5A0A0B4J1G9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.54■□□□□ 0.72
Trbv5A0A0B4J1G9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv5A0A0B4J1G9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv5A0A0B4J1G9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trbv5A0A0B4J1G9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv5A0A0B4J1G9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv5A0A0B4J1G9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv5A0A0B4J1G9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv5A0A0B4J1G9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv5A0A0B4J1G9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trbv5A0A0B4J1G9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Trbv5A0A0B4J1G9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Trbv5A0A0B4J1G9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv5A0A0B4J1G9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv5A0A0B4J1G9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv5A0A0B4J1G9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv5A0A0B4J1G9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv5A0A0B4J1G9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trbv5A0A0B4J1G9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Trbv5A0A0B4J1G9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv5A0A0B4J1G9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv5A0A0B4J1G9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv5A0A0B4J1G9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv5A0A0B4J1G9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv5A0A0B4J1G9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.43■□□□□ 0.7
Trbv5A0A0B4J1G9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms