Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
Trbc1A0A0A6YWV4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.69■■□□□ 1.22
Trbc1A0A0A6YWV4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trbc1A0A0A6YWV4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trbc1A0A0A6YWV4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trbc1A0A0A6YWV4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Trbc1A0A0A6YWV4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trbc1A0A0A6YWV4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trbc1A0A0A6YWV4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Trbc1A0A0A6YWV4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trbc1A0A0A6YWV4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trbc1A0A0A6YWV4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trbc1A0A0A6YWV4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trbc1A0A0A6YWV4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.63■■□□□ 1.21
Trbc1A0A0A6YWV4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trbc1A0A0A6YWV4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trbc1A0A0A6YWV4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trbc1A0A0A6YWV4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trbc1A0A0A6YWV4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trbc1A0A0A6YWV4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trbc1A0A0A6YWV4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trbc1A0A0A6YWV4 Gm24970-201ENSMUST00000175582 82 ntBASIC22.61■■□□□ 1.21
Trbc1A0A0A6YWV4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.61■■□□□ 1.21
Trbc1A0A0A6YWV4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trbc1A0A0A6YWV4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trbc1A0A0A6YWV4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trbc1A0A0A6YWV4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.6■■□□□ 1.21
Trbc1A0A0A6YWV4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Trbc1A0A0A6YWV4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
Trbc1A0A0A6YWV4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trbc1A0A0A6YWV4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.59■■□□□ 1.21
Trbc1A0A0A6YWV4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trbc1A0A0A6YWV4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trbc1A0A0A6YWV4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trbc1A0A0A6YWV4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trbc1A0A0A6YWV4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Trbc1A0A0A6YWV4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Trbc1A0A0A6YWV4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trbc1A0A0A6YWV4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trbc1A0A0A6YWV4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trbc1A0A0A6YWV4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Trbc1A0A0A6YWV4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trbc1A0A0A6YWV4 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.54■■□□□ 1.2
Trbc1A0A0A6YWV4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trbc1A0A0A6YWV4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trbc1A0A0A6YWV4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trbc1A0A0A6YWV4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.53■■□□□ 1.2
Trbc1A0A0A6YWV4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.53■■□□□ 1.2
Trbc1A0A0A6YWV4 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.52■■□□□ 1.2
Trbc1A0A0A6YWV4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Trbc1A0A0A6YWV4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trbc1A0A0A6YWV4 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.52■■□□□ 1.2
Trbc1A0A0A6YWV4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trbc1A0A0A6YWV4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trbc1A0A0A6YWV4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
Trbc1A0A0A6YWV4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Trbc1A0A0A6YWV4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trbc1A0A0A6YWV4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trbc1A0A0A6YWV4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trbc1A0A0A6YWV4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trbc1A0A0A6YWV4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trbc1A0A0A6YWV4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trbc1A0A0A6YWV4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trbc1A0A0A6YWV4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.48■■□□□ 1.19
Trbc1A0A0A6YWV4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.48■■□□□ 1.19
Trbc1A0A0A6YWV4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trbc1A0A0A6YWV4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trbc1A0A0A6YWV4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trbc1A0A0A6YWV4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trbc1A0A0A6YWV4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trbc1A0A0A6YWV4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.47■■□□□ 1.19
Trbc1A0A0A6YWV4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trbc1A0A0A6YWV4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Trbc1A0A0A6YWV4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Trbc1A0A0A6YWV4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trbc1A0A0A6YWV4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trbc1A0A0A6YWV4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trbc1A0A0A6YWV4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.44■■□□□ 1.18
Trbc1A0A0A6YWV4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Trbc1A0A0A6YWV4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trbc1A0A0A6YWV4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trbc1A0A0A6YWV4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Trbc1A0A0A6YWV4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trbc1A0A0A6YWV4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trbc1A0A0A6YWV4 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.41■■□□□ 1.18
Trbc1A0A0A6YWV4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trbc1A0A0A6YWV4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Trbc1A0A0A6YWV4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trbc1A0A0A6YWV4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.38■■□□□ 1.17
Trbc1A0A0A6YWV4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trbc1A0A0A6YWV4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trbc1A0A0A6YWV4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trbc1A0A0A6YWV4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trbc1A0A0A6YWV4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trbc1A0A0A6YWV4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trbc1A0A0A6YWV4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.35■■□□□ 1.17
Trbc1A0A0A6YWV4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trbc1A0A0A6YWV4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trbc1A0A0A6YWV4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trbc1A0A0A6YWV4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms