Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.38■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-11A0A0A6YWI9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-11A0A0A6YWI9 Gm24804-201ENSMUST00000174982 85 ntBASIC17.31■□□□□ 0.36
Ighv1-11A0A0A6YWI9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.31■□□□□ 0.36
Ighv1-11A0A0A6YWI9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-11A0A0A6YWI9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-11A0A0A6YWI9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-11A0A0A6YWI9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-11A0A0A6YWI9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ighv1-11A0A0A6YWI9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.25■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-11A0A0A6YWI9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-11A0A0A6YWI9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.21■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ighv1-11A0A0A6YWI9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-11A0A0A6YWI9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.19■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-11A0A0A6YWI9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.18■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Gm16148-201ENSMUST00000119653 893 ntBASIC17.17■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.17■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-11A0A0A6YWI9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-11A0A0A6YWI9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-11A0A0A6YWI9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-11A0A0A6YWI9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.08■□□□□ 0.32
Ighv1-11A0A0A6YWI9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Ighv1-11A0A0A6YWI9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ighv1-11A0A0A6YWI9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-11A0A0A6YWI9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ighv1-11A0A0A6YWI9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms