Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav16A0A075B653 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.91■□□□□ 0.62
Trav16A0A075B653 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav16A0A075B653 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav16A0A075B653 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav16A0A075B653 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Trav16A0A075B653 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav16A0A075B653 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav16A0A075B653 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav16A0A075B653 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16A0A075B653 Gm25262-201ENSMUST00000174934 133 ntBASIC18.88■□□□□ 0.61
Trav16A0A075B653 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.88■□□□□ 0.61
Trav16A0A075B653 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Trav16A0A075B653 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav16A0A075B653 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav16A0A075B653 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav16A0A075B653 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav16A0A075B653 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav16A0A075B653 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.86■□□□□ 0.61
Trav16A0A075B653 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav16A0A075B653 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav16A0A075B653 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav16A0A075B653 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav16A0A075B653 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav16A0A075B653 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav16A0A075B653 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav16A0A075B653 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trav16A0A075B653 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav16A0A075B653 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav16A0A075B653 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav16A0A075B653 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav16A0A075B653 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav16A0A075B653 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16A0A075B653 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16A0A075B653 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16A0A075B653 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trav16A0A075B653 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.81■□□□□ 0.6
Trav16A0A075B653 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16A0A075B653 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16A0A075B653 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav16A0A075B653 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav16A0A075B653 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.79■□□□□ 0.6
Trav16A0A075B653 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.79■□□□□ 0.6
Trav16A0A075B653 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav16A0A075B653 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav16A0A075B653 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trav16A0A075B653 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16A0A075B653 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16A0A075B653 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16A0A075B653 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav16A0A075B653 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav16A0A075B653 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav16A0A075B653 Gm27322-201ENSMUST00000184007 104 ntBASIC18.73■□□□□ 0.59
Trav16A0A075B653 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav16A0A075B653 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trav16A0A075B653 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav16A0A075B653 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav16A0A075B653 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav16A0A075B653 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav16A0A075B653 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trav16A0A075B653 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav16A0A075B653 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav16A0A075B653 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav16A0A075B653 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.69■□□□□ 0.58
Trav16A0A075B653 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
Trav16A0A075B653 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav16A0A075B653 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav16A0A075B653 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trav16A0A075B653 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16A0A075B653 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16A0A075B653 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trav16A0A075B653 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav16A0A075B653 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trav16A0A075B653 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav16A0A075B653 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16A0A075B653 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16A0A075B653 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16A0A075B653 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trav16A0A075B653 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.63■□□□□ 0.57
Trav16A0A075B653 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav16A0A075B653 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav16A0A075B653 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.62■□□□□ 0.57
Trav16A0A075B653 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav16A0A075B653 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav16A0A075B653 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.61■□□□□ 0.57
Trav16A0A075B653 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav16A0A075B653 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.61■□□□□ 0.57
Trav16A0A075B653 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav16A0A075B653 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trav16A0A075B653 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trav16A0A075B653 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav16A0A075B653 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms