Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav4-2A0A075B638 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav4-2A0A075B638 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav4-2A0A075B638 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav4-2A0A075B638 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav4-2A0A075B638 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav4-2A0A075B638 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav4-2A0A075B638 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.62■□□□□ 0.73
Trav4-2A0A075B638 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav4-2A0A075B638 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav4-2A0A075B638 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trav4-2A0A075B638 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav4-2A0A075B638 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav4-2A0A075B638 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav4-2A0A075B638 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav4-2A0A075B638 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav4-2A0A075B638 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav4-2A0A075B638 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav4-2A0A075B638 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav4-2A0A075B638 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trav4-2A0A075B638 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav4-2A0A075B638 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trav4-2A0A075B638 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav4-2A0A075B638 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav4-2A0A075B638 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav4-2A0A075B638 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trav4-2A0A075B638 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.53■□□□□ 0.72
Trav4-2A0A075B638 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav4-2A0A075B638 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.53■□□□□ 0.72
Trav4-2A0A075B638 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav4-2A0A075B638 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav4-2A0A075B638 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav4-2A0A075B638 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav4-2A0A075B638 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Trav4-2A0A075B638 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav4-2A0A075B638 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.51■□□□□ 0.71
Trav4-2A0A075B638 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav4-2A0A075B638 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.51■□□□□ 0.71
Trav4-2A0A075B638 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav4-2A0A075B638 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav4-2A0A075B638 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav4-2A0A075B638 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trav4-2A0A075B638 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav4-2A0A075B638 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav4-2A0A075B638 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav4-2A0A075B638 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav4-2A0A075B638 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trav4-2A0A075B638 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Trav4-2A0A075B638 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav4-2A0A075B638 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav4-2A0A075B638 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trav4-2A0A075B638 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav4-2A0A075B638 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.43■□□□□ 0.7
Trav4-2A0A075B638 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav4-2A0A075B638 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav4-2A0A075B638 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav4-2A0A075B638 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav4-2A0A075B638 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav4-2A0A075B638 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trav4-2A0A075B638 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav4-2A0A075B638 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.4■□□□□ 0.7
Trav4-2A0A075B638 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav4-2A0A075B638 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav4-2A0A075B638 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav4-2A0A075B638 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav4-2A0A075B638 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav4-2A0A075B638 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Trav4-2A0A075B638 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav4-2A0A075B638 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav4-2A0A075B638 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trav4-2A0A075B638 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trav4-2A0A075B638 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav4-2A0A075B638 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Trav4-2A0A075B638 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav4-2A0A075B638 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav4-2A0A075B638 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav4-2A0A075B638 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Trav4-2A0A075B638 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav4-2A0A075B638 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.32■□□□□ 0.68
Trav4-2A0A075B638 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav4-2A0A075B638 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav4-2A0A075B638 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav4-2A0A075B638 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav4-2A0A075B638 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trav4-2A0A075B638 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.31■□□□□ 0.68
Trav4-2A0A075B638 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav4-2A0A075B638 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Trav4-2A0A075B638 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trav4-2A0A075B638 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav4-2A0A075B638 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.29■□□□□ 0.68
Trav4-2A0A075B638 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav4-2A0A075B638 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trav4-2A0A075B638 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav4-2A0A075B638 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Trav4-2A0A075B638 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav4-2A0A075B638 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav4-2A0A075B638 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav4-2A0A075B638 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav4-2A0A075B638 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav4-2A0A075B638 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms