Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm5601-201ENSMUST00000118909 972 ntBASIC9.32□□□□□ -0.92
Hoxc9P09633 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC9.32□□□□□ -0.92
Hoxc9P09633 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm7804-202ENSMUST00000194187 854 ntBASIC9.32□□□□□ -0.92
Hoxc9P09633 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm46231-201ENSMUST00000220152 314 ntBASIC9.32□□□□□ -0.92
Hoxc9P09633 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm38173-201ENSMUST00000193126 2314 ntBASIC9.32□□□□□ -0.92
Hoxc9P09633 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Dgkh-204ENSMUST00000227767 3319 ntBASIC9.31□□□□□ -0.92
Hoxc9P09633 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxc9P09633 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Hoxc9P09633 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm14741-201ENSMUST00000120777 1009 ntBASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm15242-201ENSMUST00000122459 283 ntBASIC9.31□□□□□ -0.92
Hoxc9P09633 Mir1900-201ENSMUST00000122714 78 ntBASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm26353-201ENSMUST00000158224 255 ntBASIC9.31□□□□□ -0.92
Hoxc9P09633 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC9.31□□□□□ -0.92
Hoxc9P09633 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm3511-201ENSMUST00000199823 204 ntBASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm19175-201ENSMUST00000199895 916 ntBASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 CT010453.2-201ENSMUST00000227005 483 ntBASIC9.31□□□□□ -0.92
Hoxc9P09633 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Hoxc9P09633 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC9.31□□□□□ -0.92
Hoxc9P09633 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxc9P09633 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxc9P09633 AC132465.1-201ENSMUST00000219938 1307 ntBASIC9.31□□□□□ -0.92
Hoxc9P09633 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Hoxc9P09633 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Hoxc9P09633 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Hoxc9P09633 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Gm26144-201ENSMUST00000104475 132 ntBASIC9.3□□□□□ -0.92
Hoxc9P09633 Gm11501-201ENSMUST00000118039 581 ntBASIC9.3□□□□□ -0.92
Hoxc9P09633 Gm11553-201ENSMUST00000120682 240 ntBASIC9.3□□□□□ -0.92
Hoxc9P09633 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC9.3□□□□□ -0.92
Hoxc9P09633 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Gm22223-201ENSMUST00000157360 125 ntBASIC9.3□□□□□ -0.92
Hoxc9P09633 Gm3344-201ENSMUST00000169610 603 ntBASIC9.3□□□□□ -0.92
Hoxc9P09633 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Hoxc9P09633 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC9.3□□□□□ -0.92
Hoxc9P09633 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC9.3□□□□□ -0.92
Hoxc9P09633 AC161374.1-201ENSMUST00000224191 794 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms