Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.79□□□□□ -1.16
NcanP55066 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
NcanP55066 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.79□□□□□ -1.16
NcanP55066 Rfpl4-201ENSMUST00000045215 1598 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Gm44080-201ENSMUST00000204451 2214 ntBASIC7.79□□□□□ -1.16
NcanP55066 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NcanP55066 AC153959.1-201ENSMUST00000213617 1694 ntBASIC7.79□□□□□ -1.16
NcanP55066 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.79□□□□□ -1.16
NcanP55066 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Gm38043-201ENSMUST00000195501 5141 ntBASIC7.78□□□□□ -1.16
NcanP55066 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gm5402-201ENSMUST00000119588 1618 ntBASIC7.78□□□□□ -1.16
NcanP55066 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
NcanP55066 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.78□□□□□ -1.16
NcanP55066 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gm42700-201ENSMUST00000199071 2437 ntBASIC7.78□□□□□ -1.16
NcanP55066 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gm25785-201ENSMUST00000104129 125 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm25724-201ENSMUST00000104531 117 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm12565-201ENSMUST00000119004 649 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm13754-201ENSMUST00000120486 998 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm12307-201ENSMUST00000120581 590 ntBASIC7.78□□□□□ -1.16
NcanP55066 Mup-ps28-201ENSMUST00000120686 289 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm12593-201ENSMUST00000120981 743 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm12101-201ENSMUST00000121590 390 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC7.78□□□□□ -1.16
NcanP55066 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC7.78□□□□□ -1.16
NcanP55066 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gm20770-201ENSMUST00000193474 694 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm8929-201ENSMUST00000197781 1132 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.78□□□□□ -1.16
NcanP55066 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC7.78□□□□□ -1.16
NcanP55066 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC7.78□□□□□ -1.16
NcanP55066 AC122372.1-201ENSMUST00000215344 280 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Gm6575-201ENSMUST00000222946 697 ntBASIC7.78□□□□□ -1.16
NcanP55066 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.78□□□□□ -1.16
NcanP55066 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
NcanP55066 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gm8526-201ENSMUST00000079153 475 ntBASIC7.78□□□□□ -1.16
NcanP55066 Mir425-201ENSMUST00000083645 85 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.78□□□□□ -1.16
NcanP55066 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gm20045-201ENSMUST00000192658 5577 ntBASIC7.78□□□□□ -1.16
NcanP55066 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
NcanP55066 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
NcanP55066 Gm6368-201ENSMUST00000119727 2147 ntBASIC7.78□□□□□ -1.16
NcanP55066 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
NcanP55066 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.78□□□□□ -1.16
NcanP55066 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NcanP55066 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
NcanP55066 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
NcanP55066 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NcanP55066 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
NcanP55066 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
NcanP55066 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NcanP55066 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms