Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Gm28651-202ENSMUST00000227968 2693 ntBASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sf3b2Q3UJB0 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Tmem19-209ENSMUST00000219890 2949 ntTSL 5 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm37080-201ENSMUST00000194804 2404 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Olfr117-203ENSMUST00000215414 3498 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm13772-201ENSMUST00000118431 317 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm14727-201ENSMUST00000118526 525 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm14721-201ENSMUST00000121381 525 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm12778-201ENSMUST00000122341 333 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm26505-201ENSMUST00000176208 166 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm42897-201ENSMUST00000201486 2112 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm45734-201ENSMUST00000211916 411 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 AC124103.1-201ENSMUST00000227564 1027 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 AC123665.3-201ENSMUST00000228735 1216 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sf3b2Q3UJB0 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm11320-201ENSMUST00000119434 463 ntBASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm12593-201ENSMUST00000120981 743 ntBASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm5166-201ENSMUST00000121332 573 ntBASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm29354-201ENSMUST00000187613 696 ntBASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm42752-201ENSMUST00000198394 1106 ntBASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm43762-201ENSMUST00000201521 295 ntBASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm2975-201ENSMUST00000209710 820 ntBASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm18040-201ENSMUST00000217922 827 ntBASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 AC124601.1-201ENSMUST00000220531 135 ntBASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm42515-201ENSMUST00000199936 3583 ntBASIC9.62□□□□□ -0.87
Sf3b2Q3UJB0 Gm43430-201ENSMUST00000196513 3897 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms