Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Gm22724-201ENSMUST00000158091 127 ntBASIC7.41□□□□□ -1.22
HttP42859 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.41□□□□□ -1.22
HttP42859 Gm5154-201ENSMUST00000203971 399 ntBASIC7.41□□□□□ -1.22
HttP42859 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.41□□□□□ -1.22
HttP42859 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Snora21-201ENSMUST00000082967 137 ntBASIC7.41□□□□□ -1.22
HttP42859 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
HttP42859 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.41□□□□□ -1.22
HttP42859 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HttP42859 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HttP42859 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
HttP42859 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
HttP42859 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
HttP42859 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 AC155298.2-201ENSMUST00000225485 6226 ntBASIC7.41□□□□□ -1.22
HttP42859 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
HttP42859 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Gm28934-201ENSMUST00000186491 346 ntBASIC7.41□□□□□ -1.22
HttP42859 Gm28952-201ENSMUST00000189285 681 ntBASIC7.41□□□□□ -1.22
HttP42859 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.41□□□□□ -1.22
HttP42859 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
HttP42859 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.41□□□□□ -1.22
HttP42859 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.41□□□□□ -1.22
HttP42859 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
HttP42859 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
HttP42859 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
HttP42859 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC7.4□□□□□ -1.22
HttP42859 Ppip5k1-203ENSMUST00000110626 5171 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
HttP42859 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
HttP42859 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.4□□□□□ -1.22
HttP42859 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.4□□□□□ -1.22
HttP42859 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.4□□□□□ -1.22
HttP42859 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.4□□□□□ -1.22
HttP42859 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.4□□□□□ -1.22
HttP42859 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
HttP42859 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
HttP42859 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Gm5512-201ENSMUST00000218013 1353 ntBASIC7.4□□□□□ -1.22
HttP42859 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.4□□□□□ -1.22
HttP42859 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
HttP42859 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HttP42859 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.4□□□□□ -1.23
HttP42859 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HttP42859 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HttP42859 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
HttP42859 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
HttP42859 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.4□□□□□ -1.23
HttP42859 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.4□□□□□ -1.23
HttP42859 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
HttP42859 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
HttP42859 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.4□□□□□ -1.23
HttP42859 Gm43054-201ENSMUST00000199495 884 ntBASIC7.4□□□□□ -1.23
HttP42859 Gm46203-201ENSMUST00000218130 478 ntBASIC7.4□□□□□ -1.23
HttP42859 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC7.4□□□□□ -1.23
HttP42859 Gm7252-201ENSMUST00000223284 456 ntBASIC7.4□□□□□ -1.23
HttP42859 AC164618.3-201ENSMUST00000224863 681 ntBASIC7.4□□□□□ -1.23
HttP42859 AW822073-201ENSMUST00000075305 555 ntBASIC7.4□□□□□ -1.23
HttP42859 Gm22865-201ENSMUST00000083949 214 ntBASIC7.4□□□□□ -1.23
HttP42859 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HttP42859 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HttP42859 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
HttP42859 Gm16630-201ENSMUST00000180741 3257 ntTSL 5 BASIC7.4□□□□□ -1.23
HttP42859 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
HttP42859 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.39□□□□□ -1.23
HttP42859 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
HttP42859 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Gm26422-201ENSMUST00000104276 132 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms