Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 A930037H05Rik-203ENSMUST00000207446 4320 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Trim66-201ENSMUST00000033339 4354 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Mbnl3-201ENSMUST00000041495 1803 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Olfr687-201ENSMUST00000098154 938 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm42444-201ENSMUST00000199366 4558 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm44627-201ENSMUST00000206739 1531 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm25427-201ENSMUST00000157605 103 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm9118-201ENSMUST00000219246 754 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm5124-202ENSMUST00000132683 2083 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm23426-201ENSMUST00000122483 318 ntBASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm23674-201ENSMUST00000157473 131 ntBASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm26489-201ENSMUST00000157880 264 ntBASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm25675-201ENSMUST00000174979 118 ntBASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm17766-201ENSMUST00000209223 442 ntBASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Trim36-201ENSMUST00000037011 4544 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Rc3h2-203ENSMUST00000112936 5828 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm43287-201ENSMUST00000197747 600 ntBASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm24695-201ENSMUST00000083877 83 ntBASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col6a3E9PWQ3 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Gm14335-201ENSMUST00000119165 810 ntBASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Gm3810-201ENSMUST00000122413 476 ntBASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Gm17086-201ENSMUST00000171346 484 ntBASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Gm20702-201ENSMUST00000176181 460 ntBASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Gm26731-201ENSMUST00000180683 543 ntBASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Gm28061-201ENSMUST00000189085 807 ntBASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 AW822073-201ENSMUST00000075305 555 ntBASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms