Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Gm18284-201ENSMUST00000172604 624 ntBASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Gm7514-201ENSMUST00000209475 934 ntBASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
H2afb2S4R1M3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.46■□□□□ 0.55
H2afb2S4R1M3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Gm6420-201ENSMUST00000193885 723 ntBASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb2S4R1M3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb2S4R1M3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb2S4R1M3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
H2afb2S4R1M3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb2S4R1M3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb2S4R1M3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb2S4R1M3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb2S4R1M3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Nespas-201ENSMUST00000143738 1083 ntBASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 AV356131-201ENSMUST00000206201 750 ntBASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
H2afb2S4R1M3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms