Protein–RNA interactions for Protein: Q9WTN3

Srebf1, Sterol regulatory element-binding protein 1, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf1Q9WTN3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srebf1Q9WTN3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Srebf1Q9WTN3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Srebf1Q9WTN3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Srebf1Q9WTN3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.81■□□□□ 0.44
Srebf1Q9WTN3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srebf1Q9WTN3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.81■□□□□ 0.44
Srebf1Q9WTN3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srebf1Q9WTN3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srebf1Q9WTN3 BC021767-201ENSMUST00000126387 1716 ntBASIC17.81■□□□□ 0.44
Srebf1Q9WTN3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srebf1Q9WTN3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srebf1Q9WTN3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Gm5643-201ENSMUST00000117081 966 ntBASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Mir6982-201ENSMUST00000184354 68 ntBASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srebf1Q9WTN3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srebf1Q9WTN3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Srebf1Q9WTN3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Srebf1Q9WTN3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.77■□□□□ 0.44
Srebf1Q9WTN3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Srebf1Q9WTN3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.77■□□□□ 0.44
Srebf1Q9WTN3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Srebf1Q9WTN3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Srebf1Q9WTN3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Srebf1Q9WTN3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Srebf1Q9WTN3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Srebf1Q9WTN3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Srebf1Q9WTN3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Srebf1Q9WTN3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Srebf1Q9WTN3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Srebf1Q9WTN3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 Dio3-201ENSMUST00000097228 1449 ntBASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srebf1Q9WTN3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms