Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Gm10232-201ENSMUST00000089221 720 ntBASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rhox4bQ9JI43 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Etf1-202ENSMUST00000180351 108 ntBASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rhox4bQ9JI43 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Gm40881-201ENSMUST00000223397 166 ntBASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Gm9870-201ENSMUST00000063874 645 ntBASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rhox4bQ9JI43 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms