Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tlr9Q9EQU3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tlr9Q9EQU3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.33■□□□□ 0.68
Tlr9Q9EQU3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.33■□□□□ 0.68
Tlr9Q9EQU3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.33■□□□□ 0.68
Tlr9Q9EQU3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlr9Q9EQU3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlr9Q9EQU3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlr9Q9EQU3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlr9Q9EQU3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.33■□□□□ 0.68
Tlr9Q9EQU3 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.33■□□□□ 0.68
Tlr9Q9EQU3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlr9Q9EQU3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr9Q9EQU3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tlr9Q9EQU3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tlr9Q9EQU3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr9Q9EQU3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tlr9Q9EQU3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr9Q9EQU3 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.32■□□□□ 0.68
Tlr9Q9EQU3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tlr9Q9EQU3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr9Q9EQU3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr9Q9EQU3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tlr9Q9EQU3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tlr9Q9EQU3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr9Q9EQU3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr9Q9EQU3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.31■□□□□ 0.68
Tlr9Q9EQU3 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.31■□□□□ 0.68
Tlr9Q9EQU3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr9Q9EQU3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr9Q9EQU3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr9Q9EQU3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr9Q9EQU3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr9Q9EQU3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr9Q9EQU3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr9Q9EQU3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr9Q9EQU3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr9Q9EQU3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr9Q9EQU3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr9Q9EQU3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.3■□□□□ 0.68
Tlr9Q9EQU3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr9Q9EQU3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr9Q9EQU3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tlr9Q9EQU3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tlr9Q9EQU3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr9Q9EQU3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr9Q9EQU3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.29■□□□□ 0.68
Tlr9Q9EQU3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Tlr9Q9EQU3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Tlr9Q9EQU3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.29■□□□□ 0.68
Tlr9Q9EQU3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr9Q9EQU3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr9Q9EQU3 Gm10602-201ENSMUST00000098239 609 ntBASIC19.29■□□□□ 0.68
Tlr9Q9EQU3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr9Q9EQU3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr9Q9EQU3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tlr9Q9EQU3 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.28■□□□□ 0.68
Tlr9Q9EQU3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr9Q9EQU3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Tlr9Q9EQU3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr9Q9EQU3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr9Q9EQU3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.28■□□□□ 0.68
Tlr9Q9EQU3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tlr9Q9EQU3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tlr9Q9EQU3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr9Q9EQU3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr9Q9EQU3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr9Q9EQU3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.27■□□□□ 0.68
Tlr9Q9EQU3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr9Q9EQU3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Tlr9Q9EQU3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.27■□□□□ 0.68
Tlr9Q9EQU3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.27■□□□□ 0.68
Tlr9Q9EQU3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tlr9Q9EQU3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr9Q9EQU3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr9Q9EQU3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tlr9Q9EQU3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tlr9Q9EQU3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.27■□□□□ 0.67
Tlr9Q9EQU3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Gm7514-201ENSMUST00000209475 934 ntBASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr9Q9EQU3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tlr9Q9EQU3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr9Q9EQU3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tlr9Q9EQU3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr9Q9EQU3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms