Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a3bpQ9EQG9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Col4a3bpQ9EQG9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a3bpQ9EQG9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a3bpQ9EQG9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a3bpQ9EQG9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Col4a3bpQ9EQG9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a3bpQ9EQG9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a3bpQ9EQG9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a3bpQ9EQG9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Col4a3bpQ9EQG9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Col4a3bpQ9EQG9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Col4a3bpQ9EQG9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
Col4a3bpQ9EQG9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a3bpQ9EQG9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Col4a3bpQ9EQG9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Col4a3bpQ9EQG9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a3bpQ9EQG9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Col4a3bpQ9EQG9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a3bpQ9EQG9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a3bpQ9EQG9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Gm37179-201ENSMUST00000194862 823 ntBASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Col4a3bpQ9EQG9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a3bpQ9EQG9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a3bpQ9EQG9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms