Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col25a1Q99MQ5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Gm12382-201ENSMUST00000122005 922 ntBASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.15■□□□□ 0.66
Col25a1Q99MQ5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Col25a1Q99MQ5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Gm17661-201ENSMUST00000170317 270 ntBASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Col25a1Q99MQ5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col25a1Q99MQ5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col25a1Q99MQ5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.13■□□□□ 0.65
Col25a1Q99MQ5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Col25a1Q99MQ5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Col25a1Q99MQ5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col25a1Q99MQ5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.13■□□□□ 0.65
Col25a1Q99MQ5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col25a1Q99MQ5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col25a1Q99MQ5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col25a1Q99MQ5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col25a1Q99MQ5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col25a1Q99MQ5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col25a1Q99MQ5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Col25a1Q99MQ5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col25a1Q99MQ5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col25a1Q99MQ5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.12■□□□□ 0.65
Col25a1Q99MQ5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.12■□□□□ 0.65
Col25a1Q99MQ5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Col25a1Q99MQ5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.12■□□□□ 0.65
Col25a1Q99MQ5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col25a1Q99MQ5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col25a1Q99MQ5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col25a1Q99MQ5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col25a1Q99MQ5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Col25a1Q99MQ5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Col25a1Q99MQ5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col25a1Q99MQ5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col25a1Q99MQ5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col25a1Q99MQ5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col25a1Q99MQ5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.11■□□□□ 0.65
Col25a1Q99MQ5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 AW822252-206ENSMUST00000208904 237 ntBASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col25a1Q99MQ5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col25a1Q99MQ5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col25a1Q99MQ5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Col25a1Q99MQ5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms