Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Reep4-203ENSMUST00000226563 1444 ntBASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Chmp1b1Q99LU0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp1b1Q99LU0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp1b1Q99LU0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp1b1Q99LU0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1b1Q99LU0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1b1Q99LU0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1b1Q99LU0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Chmp1b1Q99LU0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Chmp1b1Q99LU0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chmp1b1Q99LU0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.35■□□□□ 0.37
Chmp1b1Q99LU0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp1b1Q99LU0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms