Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfc4Q99J62 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfc4Q99J62 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfc4Q99J62 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.34■■□□□ 1.01
Rfc4Q99J62 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc4Q99J62 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc4Q99J62 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc4Q99J62 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc4Q99J62 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc4Q99J62 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc4Q99J62 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc4Q99J62 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc4Q99J62 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rfc4Q99J62 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Rfc4Q99J62 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rfc4Q99J62 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc4Q99J62 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc4Q99J62 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc4Q99J62 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc4Q99J62 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc4Q99J62 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rfc4Q99J62 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc4Q99J62 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc4Q99J62 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc4Q99J62 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.32■■□□□ 1
Rfc4Q99J62 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc4Q99J62 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc4Q99J62 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rfc4Q99J62 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.31■■□□□ 1
Rfc4Q99J62 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc4Q99J62 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Rfc4Q99J62 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Rfc4Q99J62 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc4Q99J62 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc4Q99J62 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfc4Q99J62 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.3■■□□□ 1
Rfc4Q99J62 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rfc4Q99J62 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfc4Q99J62 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfc4Q99J62 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfc4Q99J62 Gm5417-201ENSMUST00000079706 384 ntBASIC21.3■■□□□ 1
Rfc4Q99J62 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfc4Q99J62 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfc4Q99J62 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Rfc4Q99J62 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc4Q99J62 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc4Q99J62 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rfc4Q99J62 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.29■■□□□ 1
Rfc4Q99J62 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc4Q99J62 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc4Q99J62 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rfc4Q99J62 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc4Q99J62 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rfc4Q99J62 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Rfc4Q99J62 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.29■■□□□ 1
Rfc4Q99J62 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc4Q99J62 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc4Q99J62 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc4Q99J62 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.28■■□□□ 1
Rfc4Q99J62 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfc4Q99J62 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rfc4Q99J62 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.28■■□□□ 1
Rfc4Q99J62 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfc4Q99J62 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rfc4Q99J62 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Rfc4Q99J62 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rfc4Q99J62 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.27■■□□□ 1
Rfc4Q99J62 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.27■■□□□ 1
Rfc4Q99J62 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfc4Q99J62 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfc4Q99J62 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rfc4Q99J62 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rfc4Q99J62 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfc4Q99J62 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rfc4Q99J62 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rfc4Q99J62 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Gm6433-201ENSMUST00000118634 875 ntBASIC21.26■□□□□ 0.99
Rfc4Q99J62 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.26■□□□□ 0.99
Rfc4Q99J62 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rfc4Q99J62 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rfc4Q99J62 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rfc4Q99J62 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfc4Q99J62 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfc4Q99J62 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.25■□□□□ 0.99
Rfc4Q99J62 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms