Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMOQ99835 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.15■■□□□ 1.14
SMOQ99835 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.15■■□□□ 1.14
SMOQ99835 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.15■■□□□ 1.14
SMOQ99835 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.15■■□□□ 1.14
SMOQ99835 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMOQ99835 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMOQ99835 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMOQ99835 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.15■■□□□ 1.14
SMOQ99835 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.15■■□□□ 1.14
SMOQ99835 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.15■■□□□ 1.14
SMOQ99835 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.15■■□□□ 1.14
SMOQ99835 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.15■■□□□ 1.14
SMOQ99835 AC026185.1-201ENST00000445748 174 ntBASIC22.15■■□□□ 1.14
SMOQ99835 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.15■■□□□ 1.14
SMOQ99835 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.15■■□□□ 1.14
SMOQ99835 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
SMOQ99835 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMOQ99835 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
SMOQ99835 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMOQ99835 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SMOQ99835 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
SMOQ99835 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SMOQ99835 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.14■■□□□ 1.14
SMOQ99835 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SMOQ99835 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.14■■□□□ 1.13
SMOQ99835 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.14■■□□□ 1.13
SMOQ99835 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SMOQ99835 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMOQ99835 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMOQ99835 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.14■■□□□ 1.13
SMOQ99835 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMOQ99835 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SMOQ99835 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMOQ99835 CNN2P6-201ENST00000439038 900 ntBASIC22.13■■□□□ 1.13
SMOQ99835 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.13■■□□□ 1.13
SMOQ99835 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SMOQ99835 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.13■■□□□ 1.13
SMOQ99835 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.13■■□□□ 1.13
SMOQ99835 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.13■■□□□ 1.13
SMOQ99835 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMOQ99835 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMOQ99835 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMOQ99835 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SMOQ99835 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMOQ99835 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMOQ99835 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMOQ99835 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMOQ99835 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMOQ99835 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.12■■□□□ 1.13
SMOQ99835 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMOQ99835 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.12■■□□□ 1.13
SMOQ99835 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SMOQ99835 CROCCP5-201ENST00000436658 830 ntBASIC22.12■■□□□ 1.13
SMOQ99835 TERF1P5-201ENST00000477545 1207 ntBASIC22.12■■□□□ 1.13
SMOQ99835 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.12■■□□□ 1.13
SMOQ99835 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.12■■□□□ 1.13
SMOQ99835 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SMOQ99835 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMOQ99835 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.12■■□□□ 1.13
SMOQ99835 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMOQ99835 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.12■■□□□ 1.13
SMOQ99835 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.12■■□□□ 1.13
SMOQ99835 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.11■■□□□ 1.13
SMOQ99835 AC231657.2-201ENST00000624556 255 ntBASIC22.11■■□□□ 1.13
SMOQ99835 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.11■■□□□ 1.13
SMOQ99835 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.11■■□□□ 1.13
SMOQ99835 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
SMOQ99835 AC244015.2-201ENST00000616358 1861 ntBASIC22.11■■□□□ 1.13
SMOQ99835 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SMOQ99835 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.11■■□□□ 1.13
SMOQ99835 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMOQ99835 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMOQ99835 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SMOQ99835 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMOQ99835 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
SMOQ99835 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMOQ99835 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMOQ99835 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.1■■□□□ 1.13
SMOQ99835 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.1■■□□□ 1.13
SMOQ99835 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.1■■□□□ 1.13
SMOQ99835 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.1■■□□□ 1.13
SMOQ99835 RBM17P2-201ENST00000616397 1405 ntBASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms