Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Pcdhga6Q91XY2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga6Q91XY2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhga6Q91XY2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhga6Q91XY2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Gm11249-201ENSMUST00000117071 859 ntBASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga6Q91XY2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 AA386476-201ENSMUST00000098781 1665 ntBASIC18.25■□□□□ 0.51
Pcdhga6Q91XY2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga6Q91XY2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Gm43799-201ENSMUST00000201845 579 ntBASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Gm44549-201ENSMUST00000208351 577 ntBASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga6Q91XY2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms