Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhgc5Q91XW9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhgc5Q91XW9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.01■□□□□ 0.95
Pcdhgc5Q91XW9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgc5Q91XW9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgc5Q91XW9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgc5Q91XW9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgc5Q91XW9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgc5Q91XW9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgc5Q91XW9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgc5Q91XW9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgc5Q91XW9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgc5Q91XW9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhgc5Q91XW9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhgc5Q91XW9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.99■□□□□ 0.95
Pcdhgc5Q91XW9 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.99■□□□□ 0.95
Pcdhgc5Q91XW9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgc5Q91XW9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgc5Q91XW9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgc5Q91XW9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc5Q91XW9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc5Q91XW9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc5Q91XW9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc5Q91XW9 Gm6576-201ENSMUST00000169678 883 ntBASIC20.98■□□□□ 0.95
Pcdhgc5Q91XW9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc5Q91XW9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhgc5Q91XW9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Pcdhgc5Q91XW9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc5Q91XW9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc5Q91XW9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc5Q91XW9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhgc5Q91XW9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgc5Q91XW9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgc5Q91XW9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgc5Q91XW9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgc5Q91XW9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.97■□□□□ 0.95
Pcdhgc5Q91XW9 Gm715-201ENSMUST00000117865 831 ntBASIC20.97■□□□□ 0.95
Pcdhgc5Q91XW9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgc5Q91XW9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgc5Q91XW9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgc5Q91XW9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Gm2559-201ENSMUST00000201323 363 ntBASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgc5Q91XW9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc5Q91XW9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms